Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN6P29350 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN6P29350 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.83□□□□□ -1.64
PTPN6P29350 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN6P29350 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN6P29350 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN6P29350 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN6P29350 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN6P29350 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PTPN6P29350 AC063976.2-201ENST00000425667 3556 ntBASIC4.83□□□□□ -1.64
PTPN6P29350 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.82□□□□□ -1.64
PTPN6P29350 LINC01355-201ENST00000566551 5444 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN6P29350 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 AC092079.1-201ENST00000558620 1985 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN6P29350 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTPN6P29350 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTPN6P29350 SNORA74A-201ENST00000364089 198 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 RNU1-43P-201ENST00000365052 165 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTPN6P29350 DUTP5-201ENST00000406790 469 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 RN7SKP273-201ENST00000411392 314 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 TXNP2-201ENST00000443918 295 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 AURKAPS1-201ENST00000451805 1212 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AL354710.1-201ENST00000453641 246 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.82□□□□□ -1.64
PTPN6P29350 AC005532.2-201ENST00000467154 373 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AC021205.1-201ENST00000468797 348 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AC008953.1-201ENST00000497334 318 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AC093763.2-201ENST00000505334 1223 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN6P29350 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 AC012400.1-201ENST00000518452 381 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.82□□□□□ -1.64
PTPN6P29350 HAUS8P1-201ENST00000549005 542 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.82□□□□□ -1.64
PTPN6P29350 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 HMGB1P51-201ENST00000605166 638 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AC037198.3-201ENST00000616754 526 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 AC018445.2-201ENST00000622987 260 ntBASIC4.82□□□□□ -1.64
PTPN6P29350 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.82□□□□□ -1.64
PTPN6P29350 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN6P29350 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN6P29350 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
PTPN6P29350 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTPN6P29350 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN6P29350 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 AL445437.1-201ENST00000623157 3087 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 HSPD1P11-201ENST00000508643 1702 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 SPATA2P1-201ENST00000431223 2055 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 SNORA2.3-201ENST00000383920 135 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 MT-TP-201ENST00000387461 68 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PTPN6P29350 ST13P16-201ENST00000401760 781 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 DPPA2P3-201ENST00000411853 655 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN6P29350 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 OR2AH1P-201ENST00000425717 928 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN6P29350 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AC005033.1-201ENST00000428904 813 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 BX323845.1-201ENST00000432417 179 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 EEF1B2P5-201ENST00000444820 548 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN6P29350 AL157884.3-201ENST00000448273 1184 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AL389915.2-201ENST00000454576 441 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN6P29350 Z92846.1-201ENST00000456203 268 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN6P29350 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.81□□□□□ -1.64
PTPN6P29350 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 IGHV3-63-201ENST00000518422 341 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
PTPN6P29350 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 OR4V1P-201ENST00000525394 1140 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms