Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RXRBP28702 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RXRBP28702 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RXRBP28702 AC009120.2-204ENST00000621548 2032 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AL034546.1-201ENST00000623740 3693 ntBASIC7.51□□□□□ -1.21
RXRBP28702 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.51□□□□□ -1.21
RXRBP28702 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 RNA5SP388-201ENST00000362584 119 ntBASIC7.51□□□□□ -1.21
RXRBP28702 RNA5SP505-201ENST00000364748 108 ntBASIC7.51□□□□□ -1.21
RXRBP28702 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 MIR640-201ENST00000385086 96 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AL603865.2-201ENST00000401679 213 ntBASIC7.51□□□□□ -1.21
RXRBP28702 ZNF603P-201ENST00000405613 487 ntBASIC7.51□□□□□ -1.21
RXRBP28702 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.51□□□□□ -1.21
RXRBP28702 RNU6ATAC34P-201ENST00000408879 121 ntBASIC7.51□□□□□ -1.21
RXRBP28702 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.51□□□□□ -1.21
RXRBP28702 AC211486.3-201ENST00000412694 621 ntBASIC7.51□□□□□ -1.21
RXRBP28702 OR6C64P-201ENST00000419708 825 ntBASIC7.51□□□□□ -1.21
RXRBP28702 CYP4F30P-202ENST00000420048 405 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.51□□□□□ -1.21
RXRBP28702 AC019178.2-201ENST00000423595 505 ntBASIC7.51□□□□□ -1.21
RXRBP28702 MTND4P20-201ENST00000424125 869 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC7.51□□□□□ -1.21
RXRBP28702 AL121601.2-201ENST00000438019 707 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.51□□□□□ -1.21
RXRBP28702 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 AC008565.1-201ENST00000509046 885 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.51□□□□□ -1.21
RXRBP28702 AC006518.2-201ENST00000542513 940 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC008147.3-201ENST00000548666 354 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.51□□□□□ -1.21
RXRBP28702 SERPINE4P-201ENST00000554978 281 ntBASIC7.51□□□□□ -1.21
RXRBP28702 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.51□□□□□ -1.21
RXRBP28702 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.51□□□□□ -1.21
RXRBP28702 DHFRP1-201ENST00000579682 559 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.51□□□□□ -1.21
RXRBP28702 AC011447.4-201ENST00000587562 111 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC011487.3-201ENST00000593607 453 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC079880.2-201ENST00000603790 1213 ntBASIC7.51□□□□□ -1.21
RXRBP28702 DPRXP5-201ENST00000604662 539 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AL590240.3-201ENST00000621416 943 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC024595.1-201ENST00000623088 387 ntBASIC7.51□□□□□ -1.21
RXRBP28702 AC232271.1-201ENST00000602455 2715 ntBASIC7.51□□□□□ -1.21
RXRBP28702 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 BIN2P1-201ENST00000504996 1530 ntBASIC7.51□□□□□ -1.21
RXRBP28702 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.51□□□□□ -1.21
RXRBP28702 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RXRBP28702 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.51□□□□□ -1.21
RXRBP28702 IMMTP1-201ENST00000435590 2219 ntBASIC7.51□□□□□ -1.21
RXRBP28702 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RXRBP28702 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RXRBP28702 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
RXRBP28702 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.5□□□□□ -1.21
RXRBP28702 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RXRBP28702 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 AL136310.1-201ENST00000404926 654 ntBASIC7.5□□□□□ -1.21
RXRBP28702 MIR1193-201ENST00000408109 78 ntBASIC7.5□□□□□ -1.21
RXRBP28702 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.5□□□□□ -1.21
RXRBP28702 COX6B1P1-201ENST00000415962 213 ntBASIC7.5□□□□□ -1.21
RXRBP28702 AC119751.6-201ENST00000416712 186 ntBASIC7.5□□□□□ -1.21
RXRBP28702 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.5□□□□□ -1.21
RXRBP28702 AC093655.2-201ENST00000425735 631 ntBASIC7.5□□□□□ -1.21
RXRBP28702 RSL24D1P6-201ENST00000426934 401 ntBASIC7.5□□□□□ -1.21
RXRBP28702 RBMX2P4-201ENST00000441256 376 ntBASIC7.5□□□□□ -1.21
RXRBP28702 MTND5P2-201ENST00000442927 1142 ntBASIC7.5□□□□□ -1.21
RXRBP28702 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 AC097262.1-201ENST00000452559 548 ntBASIC7.5□□□□□ -1.21
RXRBP28702 AL133477.1-201ENST00000457472 514 ntBASIC7.5□□□□□ -1.21
RXRBP28702 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.5□□□□□ -1.21
RXRBP28702 MTAPP1-201ENST00000489154 819 ntBASIC7.5□□□□□ -1.21
RXRBP28702 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.5□□□□□ -1.21
RXRBP28702 AC073610.1-201ENST00000489971 396 ntBASIC7.5□□□□□ -1.21
RXRBP28702 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC7.5□□□□□ -1.21
RXRBP28702 ABCA11P-202ENST00000504019 2110 ntBASIC7.5□□□□□ -1.21
RXRBP28702 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.5□□□□□ -1.21
RXRBP28702 RNU6-759P-201ENST00000516740 103 ntBASIC7.5□□□□□ -1.21
RXRBP28702 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.5□□□□□ -1.21
RXRBP28702 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.5□□□□□ -1.21
RXRBP28702 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 AP000619.2-201ENST00000546014 969 ntBASIC7.5□□□□□ -1.21
RXRBP28702 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.5□□□□□ -1.21
RXRBP28702 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC7.5□□□□□ -1.21
RXRBP28702 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.5□□□□□ -1.21
RXRBP28702 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.5□□□□□ -1.21
RXRBP28702 RSL24D1P11-201ENST00000591045 491 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms