Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AP002812.4-201ENST00000532139 286 ntBASIC8.42□□□□□ -1.06
PTPREP23469 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.42□□□□□ -1.06
PTPREP23469 AC068587.4-201ENST00000533893 186 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 AC009729.1-201ENST00000548873 1133 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC138915.2-201ENST00000569776 97 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC068020.1-201ENST00000594215 661 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 AC130352.1-201ENST00000602979 661 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC092032.1-201ENST00000603090 165 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC115621.1-201ENST00000604653 858 ntBASIC8.42□□□□□ -1.06
PTPREP23469 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 OR1N1-202ENST00000619659 939 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC078909.2-201ENST00000620584 398 ntBASIC8.42□□□□□ -1.06
PTPREP23469 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 AL133216.2-202ENST00000634512 349 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AL356585.10-201ENST00000641883 123 ntBASIC8.42□□□□□ -1.06
PTPREP23469 OR7E161P-202ENST00000641994 1033 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC012618.3-205ENST00000637896 1496 ntBASIC8.42□□□□□ -1.06
PTPREP23469 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTPREP23469 AC090337.1-201ENST00000579651 2074 ntBASIC8.42□□□□□ -1.06
PTPREP23469 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
PTPREP23469 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.42□□□□□ -1.06
PTPREP23469 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
PTPREP23469 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
PTPREP23469 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.41□□□□□ -1.06
PTPREP23469 AC073342.2-201ENST00000595842 1800 ntBASIC8.41□□□□□ -1.06
PTPREP23469 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPREP23469 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPREP23469 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 OR9K1P-201ENST00000326513 941 ntBASIC8.41□□□□□ -1.06
PTPREP23469 TMSB4XP2-201ENST00000335179 210 ntBASIC8.41□□□□□ -1.06
PTPREP23469 Y_RNA.148-201ENST00000363557 117 ntBASIC8.41□□□□□ -1.06
PTPREP23469 Y_RNA.176-201ENST00000363815 109 ntBASIC8.41□□□□□ -1.06
PTPREP23469 ARSFP1-201ENST00000398758 477 ntBASIC8.41□□□□□ -1.06
PTPREP23469 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.41□□□□□ -1.06
PTPREP23469 EEF1GP7-201ENST00000422983 703 ntBASIC8.41□□□□□ -1.06
PTPREP23469 DPY19L1P2-201ENST00000426647 915 ntBASIC8.41□□□□□ -1.06
PTPREP23469 AL731892.1-201ENST00000437364 1192 ntBASIC8.41□□□□□ -1.06
PTPREP23469 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.41□□□□□ -1.06
PTPREP23469 AL845321.1-201ENST00000444603 348 ntBASIC8.41□□□□□ -1.06
PTPREP23469 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPREP23469 RPL18AP17-201ENST00000455326 198 ntBASIC8.41□□□□□ -1.06
PTPREP23469 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC8.41□□□□□ -1.06
PTPREP23469 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.41□□□□□ -1.06
PTPREP23469 MYL6P4-201ENST00000477911 453 ntBASIC8.41□□□□□ -1.06
PTPREP23469 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.41□□□□□ -1.06
PTPREP23469 RPL34P33-201ENST00000486062 334 ntBASIC8.41□□□□□ -1.06
PTPREP23469 RN7SL775P-201ENST00000498361 336 ntBASIC8.41□□□□□ -1.06
PTPREP23469 FTH1P9-201ENST00000513251 355 ntBASIC8.41□□□□□ -1.06
PTPREP23469 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
PTPREP23469 SNORA40.12-201ENST00000516329 111 ntBASIC8.41□□□□□ -1.06
PTPREP23469 AC104986.1-201ENST00000517978 436 ntBASIC8.41□□□□□ -1.06
PTPREP23469 TPM3P3-201ENST00000521343 354 ntBASIC8.41□□□□□ -1.06
PTPREP23469 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.41□□□□□ -1.06
PTPREP23469 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.41□□□□□ -1.06
PTPREP23469 AC089984.3-201ENST00000552838 363 ntBASIC8.41□□□□□ -1.06
PTPREP23469 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.41□□□□□ -1.06
PTPREP23469 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.41□□□□□ -1.06
PTPREP23469 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPREP23469 NAA50-211ENST00000630058 177 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPREP23469 MIR665-201ENST00000635949 72 ntBASIC8.41□□□□□ -1.06
PTPREP23469 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
PTPREP23469 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPREP23469 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPREP23469 AC006378.2-201ENST00000623178 2476 ntBASIC8.41□□□□□ -1.06
PTPREP23469 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.41□□□□□ -1.06
PTPREP23469 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.41□□□□□ -1.06
PTPREP23469 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPREP23469 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC8.4□□□□□ -1.06
PTPREP23469 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTPREP23469 AC025574.1-201ENST00000554784 1653 ntBASIC8.4□□□□□ -1.06
PTPREP23469 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 AC005614.1-201ENST00000598952 3653 ntBASIC8.4□□□□□ -1.06
PTPREP23469 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPREP23469 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPREP23469 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPREP23469 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
PTPREP23469 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.4□□□□□ -1.06
PTPREP23469 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPREP23469 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
PTPREP23469 RNU6-1158P-201ENST00000391167 107 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms