Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.87□□□□□ -1.79
CD28P10747 MTND6P5-201ENST00000448266 512 ntBASIC3.87□□□□□ -1.79
CD28P10747 BX842559.2-201ENST00000451418 605 ntBASIC3.87□□□□□ -1.79
CD28P10747 AC234781.3-201ENST00000452540 973 ntBASIC3.87□□□□□ -1.79
CD28P10747 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD28P10747 AC245028.2-201ENST00000458673 253 ntBASIC3.87□□□□□ -1.79
CD28P10747 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.87□□□□□ -1.79
CD28P10747 MYL12BP2-201ENST00000503948 512 ntBASIC3.87□□□□□ -1.79
CD28P10747 ENPP7P11-201ENST00000505915 627 ntBASIC3.87□□□□□ -1.79
CD28P10747 RAB9BP1-201ENST00000519581 626 ntBASIC3.87□□□□□ -1.79
CD28P10747 AC012339.2-201ENST00000523996 453 ntBASIC3.87□□□□□ -1.79
CD28P10747 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.87□□□□□ -1.79
CD28P10747 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.87□□□□□ -1.79
CD28P10747 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.87□□□□□ -1.79
CD28P10747 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.87□□□□□ -1.79
CD28P10747 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.87□□□□□ -1.79
CD28P10747 AC006272.2-201ENST00000594725 163 ntBASIC3.87□□□□□ -1.79
CD28P10747 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.87□□□□□ -1.79
CD28P10747 AC234771.5-201ENST00000600161 514 ntBASIC3.87□□□□□ -1.79
CD28P10747 AC020910.3-201ENST00000603701 874 ntBASIC3.87□□□□□ -1.79
CD28P10747 AC008745.1-201ENST00000604064 271 ntBASIC3.87□□□□□ -1.79
CD28P10747 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.87□□□□□ -1.79
CD28P10747 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.87□□□□□ -1.79
CD28P10747 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD28P10747 MIR7703-201ENST00000620784 77 ntBASIC3.87□□□□□ -1.79
CD28P10747 AC019206.1-201ENST00000621938 425 ntBASIC3.87□□□□□ -1.79
CD28P10747 MIR6810-201ENST00000622701 70 ntBASIC3.87□□□□□ -1.79
CD28P10747 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.87□□□□□ -1.79
CD28P10747 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CD28P10747 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.87□□□□□ -1.79
CD28P10747 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CD28P10747 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD28P10747 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.87□□□□□ -1.79
CD28P10747 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC3.87□□□□□ -1.79
CD28P10747 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CD28P10747 AC003985.2-201ENST00000562268 1669 ntBASIC3.87□□□□□ -1.79
CD28P10747 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD28P10747 TRIM51GP-201ENST00000534741 1350 ntBASIC3.87□□□□□ -1.79
CD28P10747 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CD28P10747 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD28P10747 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD28P10747 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD28P10747 THAP12P8-201ENST00000447914 2115 ntBASIC3.86□□□□□ -1.79
CD28P10747 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD28P10747 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CD28P10747 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD28P10747 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CD28P10747 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CD28P10747 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.86□□□□□ -1.79
CD28P10747 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CD28P10747 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CD28P10747 SNORA48.4-201ENST00000391089 134 ntBASIC3.86□□□□□ -1.79
CD28P10747 RPS4XP9-201ENST00000405151 780 ntBASIC3.86□□□□□ -1.79
CD28P10747 NPM1P40-201ENST00000412758 733 ntBASIC3.86□□□□□ -1.79
CD28P10747 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 AC119751.6-201ENST00000416712 186 ntBASIC3.86□□□□□ -1.79
CD28P10747 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.86□□□□□ -1.79
CD28P10747 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 OR6C71P-201ENST00000432580 913 ntBASIC3.86□□□□□ -1.79
CD28P10747 RAB9AP5-201ENST00000437794 597 ntBASIC3.86□□□□□ -1.79
CD28P10747 ELOCP3-201ENST00000439303 348 ntBASIC3.86□□□□□ -1.79
CD28P10747 RAB9AP2-201ENST00000443911 597 ntBASIC3.86□□□□□ -1.79
CD28P10747 AC004980.3-201ENST00000447046 365 ntBASIC3.86□□□□□ -1.79
CD28P10747 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.86□□□□□ -1.79
CD28P10747 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 MORF4L1P4-201ENST00000450245 976 ntBASIC3.86□□□□□ -1.79
CD28P10747 GAPDHP14-201ENST00000450472 937 ntBASIC3.86□□□□□ -1.79
CD28P10747 RBMY2TP-201ENST00000451162 947 ntBASIC3.86□□□□□ -1.79
CD28P10747 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC3.86□□□□□ -1.79
CD28P10747 AC010733.1-201ENST00000451515 401 ntBASIC3.86□□□□□ -1.79
CD28P10747 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 AC006967.1-201ENST00000467608 589 ntBASIC3.86□□□□□ -1.79
CD28P10747 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 RN7SL354P-201ENST00000469282 294 ntBASIC3.86□□□□□ -1.79
CD28P10747 RPL5P22-201ENST00000480199 884 ntBASIC3.86□□□□□ -1.79
CD28P10747 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 AC016687.1-201ENST00000482574 353 ntBASIC3.86□□□□□ -1.79
CD28P10747 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CD28P10747 AC093720.1-201ENST00000505681 714 ntBASIC3.86□□□□□ -1.79
CD28P10747 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.86□□□□□ -1.79
CD28P10747 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.86□□□□□ -1.79
CD28P10747 AC022616.2-201ENST00000523185 300 ntBASIC3.86□□□□□ -1.79
CD28P10747 AP001880.2-201ENST00000538233 448 ntBASIC3.86□□□□□ -1.79
CD28P10747 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 AC008126.1-201ENST00000549019 480 ntBASIC3.86□□□□□ -1.79
CD28P10747 AC006349.1-201ENST00000555526 235 ntBASIC3.86□□□□□ -1.79
CD28P10747 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.86□□□□□ -1.79
CD28P10747 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.86□□□□□ -1.79
CD28P10747 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms