Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC005332.9-201ENST00000620266 2921 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 RNU6-543P-201ENST00000362576 108 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 Y_RNA.70-201ENST00000362886 110 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 SNORA43.1-201ENST00000364863 140 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 RNU6-1011P-201ENST00000384668 107 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 ATP5F1P4-201ENST00000397288 746 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC245052.5-201ENST00000416320 649 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC098592.1-201ENST00000419352 333 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 GAPDHP23-201ENST00000444823 993 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC005002.1-201ENST00000447458 540 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 WASF1P1-201ENST00000447560 1131 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC114755.5-201ENST00000447760 831 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AL445466.1-201ENST00000448432 357 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 VN1R38P-201ENST00000450265 887 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 RPL5P32-201ENST00000454085 879 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 SNORA58-201ENST00000505219 137 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC104108.1-201ENST00000509930 412 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 PCNAP4-201ENST00000532690 730 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC004223.4-201ENST00000612426 332 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 STMN1P1-201ENST00000617809 440 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 U1.34-201ENST00000618578 162 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC005840.5-201ENST00000619166 599 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 OR5AK4P-201ENST00000635912 903 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 SAMMSON-209ENST00000641222 1100 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AL603750.1-201ENST00000624216 1717 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 GUCY1B2-204ENST00000531898 1979 ntBASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 FAM3C2-201ENST00000312214 681 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 MIR143-201ENST00000385300 106 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 OR6C69P-201ENST00000394268 893 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 RPS27AP11-201ENST00000402798 447 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AL031577.2-201ENST00000404133 280 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AL096829.1-201ENST00000413677 457 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 USP9YP31-201ENST00000431405 881 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC091390.2-201ENST00000432573 374 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 YWHAZP7-201ENST00000436906 631 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 FGF7P6-202ENST00000451282 293 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AL122020.1-201ENST00000472287 459 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 HMGN1P10-201ENST00000474557 553 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 RPL30P6-201ENST00000475925 342 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 EIF3LP3-201ENST00000495197 822 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC004069.2-201ENST00000505438 1114 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 PRDX4P1-201ENST00000507189 574 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC010285.3-201ENST00000511668 676 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 CYCSP22-201ENST00000517555 339 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 IGHVIII-38-1-201ENST00000521454 282 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AP000648.1-201ENST00000529682 397 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 DUX4L52-201ENST00000549363 777 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms