Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU1-43P-201ENST00000365052 165 ntBASIC5.31□□□□□ -1.56
TPM1P09493 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM1P09493 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TPM1P09493 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TPM1P09493 SNORA68.2-201ENST00000391263 128 ntBASIC5.31□□□□□ -1.56
TPM1P09493 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM1P09493 LAP3P1-201ENST00000403648 294 ntBASIC5.31□□□□□ -1.56
TPM1P09493 AL080315.1-201ENST00000406055 466 ntBASIC5.31□□□□□ -1.56
TPM1P09493 SNORA81-201ENST00000408493 178 ntBASIC5.31□□□□□ -1.56
TPM1P09493 RNA5SP178-201ENST00000410380 128 ntBASIC5.31□□□□□ -1.56
TPM1P09493 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM1P09493 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.31□□□□□ -1.56
TPM1P09493 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM1P09493 RPL23AP65-201ENST00000475608 468 ntBASIC5.31□□□□□ -1.56
TPM1P09493 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TPM1P09493 RN7SL244P-201ENST00000493405 297 ntBASIC5.31□□□□□ -1.56
TPM1P09493 RNU6-709P-201ENST00000517257 104 ntBASIC5.31□□□□□ -1.56
TPM1P09493 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM1P09493 DYNLL1P4-201ENST00000549314 266 ntBASIC5.31□□□□□ -1.56
TPM1P09493 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.31□□□□□ -1.56
TPM1P09493 AL589674.2-201ENST00000604304 337 ntBASIC5.31□□□□□ -1.56
TPM1P09493 AC007204.2-201ENST00000615022 616 ntBASIC5.31□□□□□ -1.56
TPM1P09493 AL357153.4-201ENST00000620487 1016 ntBASIC5.31□□□□□ -1.56
TPM1P09493 AC015804.1-201ENST00000622935 435 ntBASIC5.31□□□□□ -1.56
TPM1P09493 AC087821.1-201ENST00000623639 567 ntBASIC5.31□□□□□ -1.56
TPM1P09493 AC136428.4-201ENST00000634254 1155 ntBASIC5.31□□□□□ -1.56
TPM1P09493 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM1P09493 AC008758.3-201ENST00000507003 1829 ntBASIC5.31□□□□□ -1.56
TPM1P09493 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM1P09493 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM1P09493 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TPM1P09493 AL136164.3-201ENST00000624429 3978 ntBASIC5.31□□□□□ -1.56
TPM1P09493 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM1P09493 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM1P09493 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TPM1P09493 CASC19-281ENST00000642118 1554 ntBASIC5.3□□□□□ -1.56
TPM1P09493 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM1P09493 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM1P09493 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM1P09493 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TPM1P09493 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.3□□□□□ -1.56
TPM1P09493 MTND4LP12-201ENST00000448237 295 ntBASIC5.3□□□□□ -1.56
TPM1P09493 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM1P09493 TRBV8-1-201ENST00000481590 279 ntBASIC5.3□□□□□ -1.56
TPM1P09493 AC090142.2-201ENST00000483263 416 ntBASIC5.3□□□□□ -1.56
TPM1P09493 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM1P09493 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM1P09493 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM1P09493 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.3□□□□□ -1.56
TPM1P09493 CYCSP28-201ENST00000534284 321 ntBASIC5.3□□□□□ -1.56
TPM1P09493 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.3□□□□□ -1.56
TPM1P09493 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM1P09493 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM1P09493 COX6CP4-201ENST00000605798 228 ntBASIC5.3□□□□□ -1.56
TPM1P09493 AL158196.1-201ENST00000616786 434 ntBASIC5.3□□□□□ -1.56
TPM1P09493 AC126175.1-201ENST00000617041 758 ntBASIC5.3□□□□□ -1.56
TPM1P09493 AP003499.2-201ENST00000624100 483 ntBASIC5.3□□□□□ -1.56
TPM1P09493 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM1P09493 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM1P09493 AC087190.4-201ENST00000574616 8334 ntBASIC5.3□□□□□ -1.56
TPM1P09493 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM1P09493 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM1P09493 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM1P09493 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM1P09493 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
TPM1P09493 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TPM1P09493 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 RN7SKP59-201ENST00000410520 314 ntBASIC5.29□□□□□ -1.56
TPM1P09493 VN1R37P-201ENST00000419096 748 ntBASIC5.29□□□□□ -1.56
TPM1P09493 HMGB3P10-201ENST00000434734 572 ntBASIC5.29□□□□□ -1.56
TPM1P09493 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.29□□□□□ -1.56
TPM1P09493 SPRYD7P1-201ENST00000443861 570 ntBASIC5.29□□□□□ -1.56
TPM1P09493 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM1P09493 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM1P09493 AC104651.2-201ENST00000447549 528 ntBASIC5.29□□□□□ -1.56
TPM1P09493 AC116562.1-201ENST00000485355 781 ntBASIC5.29□□□□□ -1.56
TPM1P09493 RPS4XP18-201ENST00000495480 763 ntBASIC5.29□□□□□ -1.56
TPM1P09493 COX6B1P5-201ENST00000509843 249 ntBASIC5.29□□□□□ -1.56
TPM1P09493 BX510359.5-201ENST00000515651 304 ntBASIC5.29□□□□□ -1.56
TPM1P09493 RNA5SP392-201ENST00000516905 112 ntBASIC5.29□□□□□ -1.56
TPM1P09493 MYL12AP1-201ENST00000518490 515 ntBASIC5.29□□□□□ -1.56
TPM1P09493 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM1P09493 OR7E128P-201ENST00000532736 1024 ntBASIC5.29□□□□□ -1.56
TPM1P09493 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TPM1P09493 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.29□□□□□ -1.56
TPM1P09493 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM1P09493 AL121839.1-201ENST00000556233 1185 ntBASIC5.29□□□□□ -1.56
TPM1P09493 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.29□□□□□ -1.56
TPM1P09493 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM1P09493 AP005119.2-201ENST00000579735 1105 ntBASIC5.29□□□□□ -1.56
TPM1P09493 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM1P09493 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM1P09493 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms