Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.14□□□□□ -1.75
CD74P04233 AC025423.2-201ENST00000537570 439 ntBASIC4.14□□□□□ -1.75
CD74P04233 AC125612.1-201ENST00000547580 377 ntBASIC4.14□□□□□ -1.75
CD74P04233 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.14□□□□□ -1.75
CD74P04233 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.14□□□□□ -1.75
CD74P04233 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.14□□□□□ -1.75
CD74P04233 MTND2P13-201ENST00000577438 1039 ntBASIC4.14□□□□□ -1.75
CD74P04233 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.14□□□□□ -1.75
CD74P04233 VN1R81P-201ENST00000602085 372 ntBASIC4.14□□□□□ -1.75
CD74P04233 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.14□□□□□ -1.75
CD74P04233 COX6CP4-201ENST00000605798 228 ntBASIC4.14□□□□□ -1.75
CD74P04233 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.14□□□□□ -1.75
CD74P04233 RNA5SP440-201ENST00000612665 119 ntBASIC4.14□□□□□ -1.75
CD74P04233 AC009704.2-201ENST00000618739 483 ntBASIC4.14□□□□□ -1.75
CD74P04233 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.14□□□□□ -1.75
CD74P04233 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.14□□□□□ -1.75
CD74P04233 CYP4F35P-202ENST00000636121 390 ntBASIC4.14□□□□□ -1.75
CD74P04233 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.14□□□□□ -1.75
CD74P04233 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD74P04233 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
CD74P04233 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 MTCO1P11-201ENST00000429111 1528 ntBASIC4.13□□□□□ -1.75
CD74P04233 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CD74P04233 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 OR52B1P-201ENST00000316506 909 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CD74P04233 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 SNORA70.10-201ENST00000384515 134 ntBASIC4.13□□□□□ -1.75
CD74P04233 MIR143-201ENST00000385300 106 ntBASIC4.13□□□□□ -1.75
CD74P04233 MIR921-201ENST00000401133 56 ntBASIC4.13□□□□□ -1.75
CD74P04233 RPL5P19-201ENST00000404228 893 ntBASIC4.13□□□□□ -1.75
CD74P04233 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.13□□□□□ -1.75
CD74P04233 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 AC092570.3-201ENST00000420113 693 ntBASIC4.13□□□□□ -1.75
CD74P04233 OR2X1P-201ENST00000421144 687 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC079355.1-201ENST00000421770 223 ntBASIC4.13□□□□□ -1.75
CD74P04233 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.13□□□□□ -1.75
CD74P04233 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 AL354714.3-201ENST00000447284 493 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC104651.2-201ENST00000447549 528 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.13□□□□□ -1.75
CD74P04233 AC023141.9-201ENST00000458734 412 ntBASIC4.13□□□□□ -1.75
CD74P04233 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 RN7SL717P-201ENST00000478343 297 ntBASIC4.13□□□□□ -1.75
CD74P04233 UBA52P3-201ENST00000491303 382 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 NPM1P6-201ENST00000521088 871 ntBASIC4.13□□□□□ -1.75
CD74P04233 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.13□□□□□ -1.75
CD74P04233 CYCSP28-201ENST00000534284 321 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC134349.2-201ENST00000535136 910 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC135626.1-201ENST00000556983 435 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.13□□□□□ -1.75
CD74P04233 MIR4505-201ENST00000582238 73 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC026979.4-201ENST00000606555 645 ntBASIC4.13□□□□□ -1.75
CD74P04233 AL354950.1-201ENST00000614150 568 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC009237.17-201ENST00000618111 748 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 AC012414.7-202ENST00000622705 1090 ntBASIC4.13□□□□□ -1.75
CD74P04233 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 AL445437.1-201ENST00000623157 3087 ntBASIC4.13□□□□□ -1.75
CD74P04233 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.13□□□□□ -1.75
CD74P04233 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 ECM1P2-201ENST00000503354 1577 ntBASIC4.13□□□□□ -1.75
CD74P04233 AC091046.3-201ENST00000631455 1574 ntBASIC4.13□□□□□ -1.75
CD74P04233 CIR1P2-201ENST00000514821 1342 ntBASIC4.13□□□□□ -1.75
CD74P04233 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD74P04233 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CD74P04233 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CD74P04233 AL672167.1-203ENST00000641299 2975 ntBASIC4.12□□□□□ -1.75
CD74P04233 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.12□□□□□ -1.75
CD74P04233 AC017104.4-201ENST00000636283 1592 ntBASIC4.12□□□□□ -1.75
CD74P04233 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD74P04233 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CD74P04233 AC019155.1-201ENST00000382242 574 ntBASIC4.12□□□□□ -1.75
CD74P04233 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD74P04233 AL121834.1-202ENST00000404494 277 ntBASIC4.12□□□□□ -1.75
CD74P04233 HDGFP1-201ENST00000405943 252 ntBASIC4.12□□□□□ -1.75
CD74P04233 NCSTNP1-201ENST00000406229 144 ntBASIC4.12□□□□□ -1.75
CD74P04233 RN7SKP229-201ENST00000410465 302 ntBASIC4.12□□□□□ -1.75
CD74P04233 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CD74P04233 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms