Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPL23AP43-201ENST00000446445 471 ntBASIC2.83□□□□□ -1.96
APOBP04114 RPS7P7-201ENST00000463499 571 ntBASIC2.83□□□□□ -1.96
APOBP04114 AC104164.2-201ENST00000496953 495 ntBASIC2.83□□□□□ -1.96
APOBP04114 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 PYM1-205ENST00000547925 499 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 MIR6891-201ENST00000618788 93 ntBASIC2.83□□□□□ -1.96
APOBP04114 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 AC008549.2-201ENST00000333482 706 ntBASIC2.83□□□□□ -1.96
APOBP04114 SDHCP2-201ENST00000398565 501 ntBASIC2.83□□□□□ -1.96
APOBP04114 AL583835.1-201ENST00000399570 407 ntBASIC2.83□□□□□ -1.96
APOBP04114 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
APOBP04114 AC011998.1-201ENST00000433403 117 ntBASIC2.83□□□□□ -1.96
APOBP04114 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 ISCUP1-201ENST00000454451 448 ntBASIC2.83□□□□□ -1.96
APOBP04114 AC007967.1-201ENST00000455422 1159 ntBASIC2.83□□□□□ -1.96
APOBP04114 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 AP003730.1-201ENST00000524605 285 ntBASIC2.83□□□□□ -1.96
APOBP04114 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 AC022884.2-201ENST00000578535 580 ntBASIC2.83□□□□□ -1.96
APOBP04114 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 MAPK10-349ENST00000641767 3661 ntBASIC2.83□□□□□ -1.96
APOBP04114 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 AC091564.1-201ENST00000464563 479 ntBASIC2.83□□□□□ -1.96
APOBP04114 RNA5SP519-201ENST00000516480 119 ntBASIC2.83□□□□□ -1.96
APOBP04114 TBCA-207ENST00000520039 157 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 AC243960.7-201ENST00000623532 707 ntBASIC2.83□□□□□ -1.96
APOBP04114 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 LARP1BP1-201ENST00000506036 1359 ntBASIC2.82□□□□□ -1.96
APOBP04114 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC2.82□□□□□ -1.96
APOBP04114 AC093297.3-201ENST00000607056 2517 ntBASIC2.82□□□□□ -1.96
APOBP04114 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC2.82□□□□□ -1.96
APOBP04114 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 RNA5SP151-201ENST00000365632 117 ntBASIC2.82□□□□□ -1.96
APOBP04114 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 UBBP2-201ENST00000376781 231 ntBASIC2.82□□□□□ -1.96
APOBP04114 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 RPS3AP12-201ENST00000443616 753 ntBASIC2.82□□□□□ -1.96
APOBP04114 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
APOBP04114 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBP04114 AC093014.1-201ENST00000548926 724 ntBASIC2.82□□□□□ -1.96
APOBP04114 AC025857.2-201ENST00000602711 238 ntBASIC2.82□□□□□ -1.96
APOBP04114 AC093388.1-201ENST00000609166 430 ntBASIC2.82□□□□□ -1.96
APOBP04114 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC2.82□□□□□ -1.96
APOBP04114 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBP04114 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 AC079804.1-201ENST00000461922 436 ntBASIC2.82□□□□□ -1.96
APOBP04114 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBP04114 AC016559.2-201ENST00000510759 359 ntBASIC2.82□□□□□ -1.96
APOBP04114 TRMT10BP1-201ENST00000519377 943 ntBASIC2.82□□□□□ -1.96
APOBP04114 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 AC005868.1-201ENST00000536421 331 ntBASIC2.82□□□□□ -1.96
APOBP04114 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 MIR3944-201ENST00000581277 108 ntBASIC2.82□□□□□ -1.96
APOBP04114 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBP04114 AL352984.2-202ENST00000613699 155 ntBASIC2.82□□□□□ -1.96
APOBP04114 TTC41P-205ENST00000551270 3963 ntBASIC2.82□□□□□ -1.96
APOBP04114 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms