Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 OR6C64P-201ENST00000419708 825 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 NDUFA5P1-201ENST00000433858 341 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.68□□□□□ -1.66
MT-ND1P03886 CASP3P1-201ENST00000446037 609 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MT-ND1P03886 VN1R48P-201ENST00000448149 1036 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.68□□□□□ -1.66
MT-ND1P03886 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC108751.2-201ENST00000469993 231 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 RPL5P22-201ENST00000480199 884 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 RN7SL809P-201ENST00000482040 297 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC073358.1-201ENST00000505671 684 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 RPS4XP20-201ENST00000505751 772 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.68□□□□□ -1.66
MT-ND1P03886 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.68□□□□□ -1.66
MT-ND1P03886 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.68□□□□□ -1.66
MT-ND1P03886 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.68□□□□□ -1.66
MT-ND1P03886 NPM1P35-201ENST00000533043 868 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC069307.1-201ENST00000602820 447 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 MTCO2P22-201ENST00000603246 681 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AL162574.2-201ENST00000614618 657 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 RPSAP73-201ENST00000614820 330 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.68□□□□□ -1.66
MT-ND1P03886 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.68□□□□□ -1.66
MT-ND1P03886 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MT-ND1P03886 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MT-ND1P03886 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
MT-ND1P03886 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MT-ND1P03886 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MT-ND1P03886 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.68□□□□□ -1.66
MT-ND1P03886 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 AP000542.2-201ENST00000623199 6179 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.67□□□□□ -1.66
MT-ND1P03886 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.67□□□□□ -1.66
MT-ND1P03886 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.67□□□□□ -1.66
MT-ND1P03886 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.67□□□□□ -1.66
MT-ND1P03886 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 AL133268.1-201ENST00000405676 1401 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.67□□□□□ -1.66
MT-ND1P03886 SNORA70.10-201ENST00000384515 134 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 SNORA17A-201ENST00000391185 133 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 NUDT19P3-201ENST00000404698 555 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 RN7SKP125-201ENST00000410481 302 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.67□□□□□ -1.66
MT-ND1P03886 AC009302.1-201ENST00000417147 390 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.67□□□□□ -1.66
MT-ND1P03886 RPS4XP16-201ENST00000427198 791 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 AC104843.2-201ENST00000427666 297 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 NPM1P33-201ENST00000438918 872 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AL450023.3-201ENST00000440592 271 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
MT-ND1P03886 FHP1-201ENST00000442741 703 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AL589765.3-201ENST00000446084 462 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 RPS26P41-201ENST00000450370 284 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 Z92846.1-201ENST00000456203 268 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 RN7SL443P-201ENST00000464331 290 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.67□□□□□ -1.66
MT-ND1P03886 RN7SL799P-201ENST00000475891 298 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 RN7SL717P-201ENST00000478343 297 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.67□□□□□ -1.66
MT-ND1P03886 RN7SL184P-201ENST00000488308 297 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AC020890.1-201ENST00000491837 504 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AC090568.1-201ENST00000509499 856 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 GTF2F2P1-201ENST00000511083 675 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 RN7SKP46-201ENST00000515942 234 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.67□□□□□ -1.66
MT-ND1P03886 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.67□□□□□ -1.66
MT-ND1P03886 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.67□□□□□ -1.66
MT-ND1P03886 AL512310.9-201ENST00000553311 948 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.67□□□□□ -1.66
MT-ND1P03886 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MT-ND1P03886 AC020978.7-201ENST00000575953 1187 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.67□□□□□ -1.66
MT-ND1P03886 AL359513.1-201ENST00000614364 557 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.67□□□□□ -1.66
MT-ND1P03886 AC007204.2-201ENST00000615022 616 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 MIR6861-201ENST00000618657 64 ntBASIC4.67□□□□□ -1.66
MT-ND1P03886 SNORA17.5-201ENST00000630429 132 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms