Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.11□□□□□ -1.59
APOEP02649 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.11□□□□□ -1.59
APOEP02649 RN7SL435P-201ENST00000584418 282 ntBASIC5.11□□□□□ -1.59
APOEP02649 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.11□□□□□ -1.59
APOEP02649 AC104687.2-201ENST00000604442 342 ntBASIC5.11□□□□□ -1.59
APOEP02649 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.11□□□□□ -1.59
APOEP02649 AC087385.3-201ENST00000620477 187 ntBASIC5.11□□□□□ -1.59
APOEP02649 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
APOEP02649 AC243960.7-201ENST00000623532 707 ntBASIC5.11□□□□□ -1.59
APOEP02649 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.11□□□□□ -1.59
APOEP02649 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
APOEP02649 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
APOEP02649 IRF5P1-201ENST00000504852 2164 ntBASIC5.11□□□□□ -1.59
APOEP02649 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.11□□□□□ -1.59
APOEP02649 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
APOEP02649 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
APOEP02649 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
APOEP02649 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.1□□□□□ -1.59
APOEP02649 RN7SKP149-201ENST00000363008 344 ntBASIC5.1□□□□□ -1.59
APOEP02649 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
APOEP02649 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.1□□□□□ -1.59
APOEP02649 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOEP02649 HMGB3P7-201ENST00000400214 611 ntBASIC5.1□□□□□ -1.59
APOEP02649 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOEP02649 QRSL1P2-201ENST00000418582 964 ntBASIC5.1□□□□□ -1.59
APOEP02649 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.1□□□□□ -1.59
APOEP02649 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.1□□□□□ -1.59
APOEP02649 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.1□□□□□ -1.59
APOEP02649 AC073052.1-201ENST00000440417 714 ntBASIC5.1□□□□□ -1.59
APOEP02649 CDY11P-201ENST00000447168 1651 ntBASIC5.1□□□□□ -1.59
APOEP02649 RPL31P44-201ENST00000447680 377 ntBASIC5.1□□□□□ -1.59
APOEP02649 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.1□□□□□ -1.59
APOEP02649 GYG1P1-201ENST00000460864 698 ntBASIC5.1□□□□□ -1.59
APOEP02649 OR2A3P-201ENST00000493774 953 ntBASIC5.1□□□□□ -1.59
APOEP02649 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOEP02649 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.1□□□□□ -1.59
APOEP02649 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.1□□□□□ -1.59
APOEP02649 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.1□□□□□ -1.59
APOEP02649 ENPP7P9-201ENST00000514456 627 ntBASIC5.1□□□□□ -1.59
APOEP02649 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.1□□□□□ -1.59
APOEP02649 AC021733.2-201ENST00000518830 497 ntBASIC5.1□□□□□ -1.59
APOEP02649 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.1□□□□□ -1.59
APOEP02649 AC005868.1-201ENST00000536421 331 ntBASIC5.1□□□□□ -1.59
APOEP02649 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOEP02649 AC009117.1-201ENST00000563948 554 ntBASIC5.1□□□□□ -1.59
APOEP02649 AC005332.5-201ENST00000591222 2919 ntBASIC5.1□□□□□ -1.59
APOEP02649 AC020910.3-201ENST00000603701 874 ntBASIC5.1□□□□□ -1.59
APOEP02649 AL034374.2-201ENST00000605281 548 ntBASIC5.1□□□□□ -1.59
APOEP02649 AL049539.1-201ENST00000611964 459 ntBASIC5.1□□□□□ -1.59
APOEP02649 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.1□□□□□ -1.59
APOEP02649 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
APOEP02649 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.1□□□□□ -1.59
APOEP02649 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
APOEP02649 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
APOEP02649 CASC19-204ENST00000641001 2055 ntBASIC5.09□□□□□ -1.59
APOEP02649 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
APOEP02649 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.09□□□□□ -1.59
APOEP02649 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
APOEP02649 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.09□□□□□ -1.59
APOEP02649 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
APOEP02649 GAPDHP15-201ENST00000398586 975 ntBASIC5.09□□□□□ -1.59
APOEP02649 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.09□□□□□ -1.59
APOEP02649 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.09□□□□□ -1.59
APOEP02649 TBCAP2-201ENST00000416175 326 ntBASIC5.09□□□□□ -1.59
APOEP02649 AC104837.2-201ENST00000427236 424 ntBASIC5.09□□□□□ -1.59
APOEP02649 AC092162.1-201ENST00000432828 434 ntBASIC5.09□□□□□ -1.59
APOEP02649 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.09□□□□□ -1.59
APOEP02649 AL772161.1-201ENST00000439130 476 ntBASIC5.09□□□□□ -1.59
APOEP02649 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.09□□□□□ -1.59
APOEP02649 RPL7L1P1-201ENST00000448259 785 ntBASIC5.09□□□□□ -1.59
APOEP02649 RPS3AP53-201ENST00000454716 778 ntBASIC5.09□□□□□ -1.59
APOEP02649 AC083982.1-201ENST00000485679 344 ntBASIC5.09□□□□□ -1.59
APOEP02649 NIP7P2-201ENST00000485801 544 ntBASIC5.09□□□□□ -1.59
APOEP02649 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.09□□□□□ -1.59
APOEP02649 Y_RNA.719-201ENST00000517156 106 ntBASIC5.09□□□□□ -1.59
APOEP02649 EIF4A2P5-201ENST00000529914 499 ntBASIC5.09□□□□□ -1.59
APOEP02649 GCSHP4-201ENST00000538792 439 ntBASIC5.09□□□□□ -1.59
APOEP02649 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.09□□□□□ -1.59
APOEP02649 AL049830.4-201ENST00000555149 351 ntBASIC5.09□□□□□ -1.59
APOEP02649 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.09□□□□□ -1.59
APOEP02649 BGLT3-201ENST00000564523 994 ntBASIC5.09□□□□□ -1.59
APOEP02649 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.09□□□□□ -1.59
APOEP02649 AC024940.4-201ENST00000605507 246 ntBASIC5.09□□□□□ -1.59
APOEP02649 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.09□□□□□ -1.59
APOEP02649 THAP12P8-201ENST00000447914 2115 ntBASIC5.09□□□□□ -1.59
APOEP02649 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
APOEP02649 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
APOEP02649 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
APOEP02649 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOEP02649 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
APOEP02649 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
APOEP02649 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.08□□□□□ -1.6
APOEP02649 AC097461.1-201ENST00000568928 2821 ntBASIC5.08□□□□□ -1.6
APOEP02649 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
APOEP02649 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.08□□□□□ -1.6
APOEP02649 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.08□□□□□ -1.6
APOEP02649 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
APOEP02649 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms