Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC100871.1-201ENST00000507871 1456 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 MFSD8-220ENST00000641243 1422 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.68□□□□□ -1.5
COL1A1P02452 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.68□□□□□ -1.5
COL1A1P02452 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL1A1P02452 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL1A1P02452 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL1A1P02452 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL1A1P02452 AC021146.4-201ENST00000309229 279 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 SNORA71.2-201ENST00000364941 134 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.67□□□□□ -1.5
COL1A1P02452 RN7SKP263-201ENST00000411194 309 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 GAPDHP49-201ENST00000421421 961 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 AC104333.2-201ENST00000422630 192 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 AL451139.1-201ENST00000434718 346 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 AL157385.1-201ENST00000446973 268 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 RHEBP2-201ENST00000450289 600 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.67□□□□□ -1.5
COL1A1P02452 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 OR11I1P-201ENST00000486033 954 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 PPP1R11P1-201ENST00000486095 376 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 RNA5SP464-201ENST00000516251 108 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.67□□□□□ -1.5
COL1A1P02452 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.67□□□□□ -1.5
COL1A1P02452 AC021483.2-201ENST00000567415 758 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 CYCSP40-201ENST00000575927 294 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.67□□□□□ -1.5
COL1A1P02452 AC069061.3-201ENST00000582254 823 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.67□□□□□ -1.5
COL1A1P02452 AL133338.2-201ENST00000604292 736 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 AC015914.2-201ENST00000618167 288 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COL1A1P02452 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL1A1P02452 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL1A1P02452 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
COL1A1P02452 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.67□□□□□ -1.5
COL1A1P02452 AL031119.1-201ENST00000404707 1879 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 OR14L1P-202ENST00000641545 3009 ntBASIC5.67□□□□□ -1.5
COL1A1P02452 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL1A1P02452 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.66□□□□□ -1.5
COL1A1P02452 AL121950.1-201ENST00000624993 2077 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.66□□□□□ -1.5
COL1A1P02452 PCNPP4-201ENST00000414817 517 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 NPM1P33-201ENST00000438918 872 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.66□□□□□ -1.5
COL1A1P02452 RN7SL41P-201ENST00000476144 297 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 RPL7AP10-201ENST00000481016 791 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 DEFB109A-201ENST00000482450 265 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 AC025164.1-201ENST00000496249 478 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.66□□□□□ -1.5
COL1A1P02452 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.66□□□□□ -1.5
COL1A1P02452 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.66□□□□□ -1.5
COL1A1P02452 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.66□□□□□ -1.5
COL1A1P02452 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.66□□□□□ -1.5
COL1A1P02452 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.66□□□□□ -1.5
COL1A1P02452 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
COL1A1P02452 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.66□□□□□ -1.5
COL1A1P02452 AC069366.1-201ENST00000583159 838 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.66□□□□□ -1.5
COL1A1P02452 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.66□□□□□ -1.5
COL1A1P02452 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.66□□□□□ -1.5
COL1A1P02452 U3.53-201ENST00000628922 216 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL1A1P02452 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.66□□□□□ -1.5
COL1A1P02452 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL1A1P02452 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 SAMMSON-210ENST00000641260 1308 ntBASIC5.66□□□□□ -1.5
COL1A1P02452 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.66□□□□□ -1.5
COL1A1P02452 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL1A1P02452 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL1A1P02452 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
COL1A1P02452 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL1A1P02452 AC135352.1-201ENST00000506173 1418 ntBASIC5.65□□□□□ -1.5
COL1A1P02452 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.65□□□□□ -1.5
COL1A1P02452 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL1A1P02452 RPL21P108-201ENST00000413857 481 ntBASIC5.65□□□□□ -1.5
COL1A1P02452 CKS1BP6-201ENST00000424932 240 ntBASIC5.65□□□□□ -1.5
COL1A1P02452 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.65□□□□□ -1.5
COL1A1P02452 KCTD10P1-201ENST00000434203 625 ntBASIC5.65□□□□□ -1.5
COL1A1P02452 AC138832.1-201ENST00000522871 556 ntBASIC5.65□□□□□ -1.5
COL1A1P02452 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.65□□□□□ -1.5
COL1A1P02452 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.65□□□□□ -1.5
COL1A1P02452 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL1A1P02452 OR7A19P-201ENST00000608051 733 ntBASIC5.65□□□□□ -1.5
COL1A1P02452 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms