Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RPL7P45-201ENST00000455851 743 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RNU6-599P-201ENST00000459383 107 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RNU6-1193P-201ENST00000459461 107 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RPL7AP10-201ENST00000481016 791 ntBASIC5.11□□□□□ -1.59
LDLRP01130 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
LDLRP01130 OR11I1P-201ENST00000486033 954 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RPS24P16-201ENST00000497294 392 ntBASIC5.11□□□□□ -1.59
LDLRP01130 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.11□□□□□ -1.59
LDLRP01130 AC021087.2-201ENST00000504656 1203 ntBASIC5.11□□□□□ -1.59
LDLRP01130 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.11□□□□□ -1.59
LDLRP01130 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.11□□□□□ -1.59
LDLRP01130 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.11□□□□□ -1.59
LDLRP01130 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.11□□□□□ -1.59
LDLRP01130 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.11□□□□□ -1.59
LDLRP01130 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.11□□□□□ -1.59
LDLRP01130 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.11□□□□□ -1.59
LDLRP01130 HSPE1P2-201ENST00000554777 306 ntBASIC5.11□□□□□ -1.59
LDLRP01130 AC027176.2-201ENST00000559166 746 ntBASIC5.11□□□□□ -1.59
LDLRP01130 OR1F2P-201ENST00000570470 933 ntBASIC5.11□□□□□ -1.59
LDLRP01130 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.11□□□□□ -1.59
LDLRP01130 AC005776.1-201ENST00000603164 290 ntBASIC5.11□□□□□ -1.59
LDLRP01130 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.11□□□□□ -1.59
LDLRP01130 AL445493.3-201ENST00000619568 477 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RNU6-368P-201ENST00000620928 107 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RNU6-538P-201ENST00000622329 107 ntBASIC5.11□□□□□ -1.59
LDLRP01130 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.11□□□□□ -1.59
LDLRP01130 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 AL731532.2-201ENST00000623542 1953 ntBASIC5.11□□□□□ -1.59
LDLRP01130 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 AC005294.1-201ENST00000355509 281 ntBASIC5.1□□□□□ -1.59
LDLRP01130 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
LDLRP01130 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.1□□□□□ -1.59
LDLRP01130 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.1□□□□□ -1.59
LDLRP01130 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.1□□□□□ -1.59
LDLRP01130 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 CYCSP6-201ENST00000434498 302 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.1□□□□□ -1.59
LDLRP01130 AC006466.1-201ENST00000438721 289 ntBASIC5.1□□□□□ -1.59
LDLRP01130 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 AC007000.2-201ENST00000442564 487 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AC245517.2-201ENST00000442890 346 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AL450023.1-201ENST00000450868 751 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AC002553.2-201ENST00000453217 340 ntBASIC5.1□□□□□ -1.59
LDLRP01130 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.1□□□□□ -1.59
LDLRP01130 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.1□□□□□ -1.59
LDLRP01130 AC093663.2-201ENST00000484625 313 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AC015864.1-201ENST00000496512 544 ntBASIC5.1□□□□□ -1.59
LDLRP01130 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 AC093890.1-201ENST00000502554 540 ntBASIC5.1□□□□□ -1.59
LDLRP01130 HMGB1P3-201ENST00000502802 616 ntBASIC5.1□□□□□ -1.59
LDLRP01130 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
LDLRP01130 AC027338.1-201ENST00000514840 825 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.1□□□□□ -1.59
LDLRP01130 RN7SKP34-201ENST00000516142 244 ntBASIC5.1□□□□□ -1.59
LDLRP01130 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.1□□□□□ -1.59
LDLRP01130 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.1□□□□□ -1.59
LDLRP01130 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.1□□□□□ -1.59
LDLRP01130 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 GSTP1P1-201ENST00000548078 319 ntBASIC5.1□□□□□ -1.59
LDLRP01130 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 AC025574.1-201ENST00000554784 1653 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.1□□□□□ -1.59
LDLRP01130 AC079148.1-201ENST00000565944 819 ntBASIC5.1□□□□□ -1.59
LDLRP01130 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AC126365.2-201ENST00000580630 379 ntBASIC5.1□□□□□ -1.59
LDLRP01130 AC090330.1-201ENST00000588646 764 ntBASIC5.1□□□□□ -1.59
LDLRP01130 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
LDLRP01130 AC006272.2-201ENST00000594725 163 ntBASIC5.1□□□□□ -1.59
LDLRP01130 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.1□□□□□ -1.59
LDLRP01130 AC063977.5-201ENST00000601044 974 ntBASIC5.1□□□□□ -1.59
LDLRP01130 BMS1P7-201ENST00000602440 1052 ntBASIC5.1□□□□□ -1.59
LDLRP01130 PPATP2-201ENST00000605635 508 ntBASIC5.1□□□□□ -1.59
LDLRP01130 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 AC132068.1-201ENST00000623805 459 ntBASIC5.1□□□□□ -1.59
LDLRP01130 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.1□□□□□ -1.59
LDLRP01130 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDLRP01130 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.1□□□□□ -1.59
LDLRP01130 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LDLRP01130 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 AC100778.3-201ENST00000580060 1750 ntBASIC5.09□□□□□ -1.59
LDLRP01130 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 AC079298.1-201ENST00000625026 1619 ntBASIC5.09□□□□□ -1.59
LDLRP01130 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms