Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL591379.1-207ENST00000635982 261 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC073869.7-201ENST00000640874 297 ntBASIC4.87□□□□□ -1.63
SNX3O60493 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.87□□□□□ -1.63
SNX3O60493 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX3O60493 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 IRF5P1-201ENST00000504852 2164 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX3O60493 AC005332.5-201ENST00000591222 2919 ntBASIC4.86□□□□□ -1.63
SNX3O60493 MAPK10-320ENST00000641462 6696 ntBASIC4.86□□□□□ -1.63
SNX3O60493 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SNX3O60493 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SNX3O60493 RNU6-729P-201ENST00000384399 107 ntBASIC4.86□□□□□ -1.63
SNX3O60493 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX3O60493 NUDT19P3-201ENST00000404698 555 ntBASIC4.86□□□□□ -1.63
SNX3O60493 MIR1182-201ENST00000408363 97 ntBASIC4.86□□□□□ -1.63
SNX3O60493 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 AC004690.1-201ENST00000418216 328 ntBASIC4.86□□□□□ -1.63
SNX3O60493 RPS26P13-201ENST00000419030 330 ntBASIC4.86□□□□□ -1.63
SNX3O60493 PDSS1P1-201ENST00000422953 1114 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 RPS11P7-201ENST00000442125 465 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 AC107015.1-201ENST00000466902 747 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AC021006.1-201ENST00000489849 553 ntBASIC4.86□□□□□ -1.63
SNX3O60493 RN7SL558P-201ENST00000497468 299 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AC008628.1-201ENST00000508663 265 ntBASIC4.86□□□□□ -1.63
SNX3O60493 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 AP003033.2-201ENST00000528901 805 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 AL136520.1-202ENST00000555494 763 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX3O60493 SLC25A36P1-201ENST00000590111 465 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 AC087783.2-201ENST00000605070 562 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AC004775.1-201ENST00000607389 753 ntBASIC4.86□□□□□ -1.63
SNX3O60493 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 AL356274.1-201ENST00000617064 410 ntBASIC4.86□□□□□ -1.63
SNX3O60493 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX3O60493 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX3O60493 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX3O60493 AL512283.1-201ENST00000606756 1384 ntBASIC4.86□□□□□ -1.63
SNX3O60493 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SNX3O60493 AC091046.3-201ENST00000631455 1574 ntBASIC4.86□□□□□ -1.63
SNX3O60493 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX3O60493 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX3O60493 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX3O60493 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
SNX3O60493 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SNX3O60493 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SNX3O60493 VDAC1P9-201ENST00000412766 841 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AL359885.1-201ENST00000415786 903 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX3O60493 EIF4EP1-201ENST00000422311 642 ntBASIC4.85□□□□□ -1.63
SNX3O60493 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 MORF4L1P7-201ENST00000426038 703 ntBASIC4.85□□□□□ -1.63
SNX3O60493 NDUFA5P10-201ENST00000432147 357 ntBASIC4.85□□□□□ -1.63
SNX3O60493 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX3O60493 SCAND3P1-201ENST00000439854 1060 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AMYP1-201ENST00000440059 1023 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AL513321.1-201ENST00000441175 761 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX3O60493 EEF1B2P6-201ENST00000445713 673 ntBASIC4.85□□□□□ -1.63
SNX3O60493 MTND2P6-201ENST00000455337 1030 ntBASIC4.85□□□□□ -1.63
SNX3O60493 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SNX3O60493 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.85□□□□□ -1.63
SNX3O60493 SUMO1P1-201ENST00000497904 306 ntBASIC4.85□□□□□ -1.63
SNX3O60493 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX3O60493 IGHV3-63-201ENST00000518422 341 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms