Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.22□□□□□ -1.57
LDB2O43679 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.22□□□□□ -1.57
LDB2O43679 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.22□□□□□ -1.57
LDB2O43679 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.22□□□□□ -1.57
LDB2O43679 AL049779.2-201ENST00000553847 315 ntBASIC5.22□□□□□ -1.57
LDB2O43679 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.22□□□□□ -1.57
LDB2O43679 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.22□□□□□ -1.57
LDB2O43679 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.22□□□□□ -1.57
LDB2O43679 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.22□□□□□ -1.57
LDB2O43679 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.22□□□□□ -1.57
LDB2O43679 AP005229.2-201ENST00000609980 697 ntBASIC5.22□□□□□ -1.57
LDB2O43679 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.22□□□□□ -1.57
LDB2O43679 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.22□□□□□ -1.57
LDB2O43679 AL109659.3-201ENST00000624985 950 ntBASIC5.22□□□□□ -1.57
LDB2O43679 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 PABPC1P6-201ENST00000445594 1829 ntBASIC5.22□□□□□ -1.57
LDB2O43679 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LDB2O43679 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LDB2O43679 AL356317.1-201ENST00000396110 1436 ntBASIC5.22□□□□□ -1.57
LDB2O43679 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDB2O43679 NAMPTP1-201ENST00000440465 2514 ntBASIC5.22□□□□□ -1.57
LDB2O43679 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LDB2O43679 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LDB2O43679 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LDB2O43679 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.21□□□□□ -1.58
LDB2O43679 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LDB2O43679 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LDB2O43679 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDB2O43679 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDB2O43679 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LDB2O43679 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.21□□□□□ -1.58
LDB2O43679 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDB2O43679 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDB2O43679 NUDT19P3-201ENST00000404698 555 ntBASIC5.21□□□□□ -1.58
LDB2O43679 MIR1182-201ENST00000408363 97 ntBASIC5.21□□□□□ -1.58
LDB2O43679 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 DPPA2P3-201ENST00000411853 655 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 VTI1BP4-201ENST00000427516 527 ntBASIC5.21□□□□□ -1.58
LDB2O43679 MTND2P2-201ENST00000434633 945 ntBASIC5.21□□□□□ -1.58
LDB2O43679 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.21□□□□□ -1.58
LDB2O43679 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.21□□□□□ -1.58
LDB2O43679 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 RPL7P33-201ENST00000444159 742 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 DUXAP8-207ENST00000456786 622 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 AC008410.1-201ENST00000483777 339 ntBASIC5.21□□□□□ -1.58
LDB2O43679 RPS21P4-201ENST00000487122 248 ntBASIC5.21□□□□□ -1.58
LDB2O43679 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.21□□□□□ -1.58
LDB2O43679 AC098862.1-201ENST00000504991 413 ntBASIC5.21□□□□□ -1.58
LDB2O43679 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.21□□□□□ -1.58
LDB2O43679 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.21□□□□□ -1.58
LDB2O43679 AC044860.2-201ENST00000561005 179 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 EIF1P5-201ENST00000585002 234 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.21□□□□□ -1.58
LDB2O43679 AL357094.1-201ENST00000603845 844 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AC112220.2-201ENST00000605513 533 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AP001033.2-201ENST00000609701 1003 ntBASIC5.21□□□□□ -1.58
LDB2O43679 DUXAP10-204ENST00000612052 616 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AC016769.4-201ENST00000616893 535 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.21□□□□□ -1.58
LDB2O43679 AC093875.1-201ENST00000623688 504 ntBASIC5.21□□□□□ -1.58
LDB2O43679 FRG1EP-201ENST00000634469 770 ntBASIC5.21□□□□□ -1.58
LDB2O43679 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.21□□□□□ -1.58
LDB2O43679 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
LDB2O43679 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDB2O43679 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
LDB2O43679 AC109780.1-201ENST00000451768 1344 ntBASIC5.21□□□□□ -1.58
LDB2O43679 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDB2O43679 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.2□□□□□ -1.58
LDB2O43679 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 HSPD1P14-201ENST00000432666 1618 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.2□□□□□ -1.58
LDB2O43679 AP001284.1-201ENST00000528393 2118 ntBASIC5.2□□□□□ -1.58
LDB2O43679 TRIM51GP-201ENST00000534741 1350 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC011493.1-201ENST00000596753 1632 ntBASIC5.2□□□□□ -1.58
LDB2O43679 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LDB2O43679 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.2□□□□□ -1.58
LDB2O43679 AC093671.1-201ENST00000624981 2929 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms