Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SDCBPO00560 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDCBPO00560 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4□□□□□ -1.77
SDCBPO00560 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4□□□□□ -1.77
SDCBPO00560 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4□□□□□ -1.77
SDCBPO00560 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDCBPO00560 RNU4-4P-201ENST00000364588 130 ntBASIC4□□□□□ -1.77
SDCBPO00560 RN7SKP269-201ENST00000365545 319 ntBASIC4□□□□□ -1.77
SDCBPO00560 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4□□□□□ -1.77
SDCBPO00560 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDCBPO00560 MIR765-201ENST00000390226 114 ntBASIC4□□□□□ -1.77
SDCBPO00560 RN7SKP213-201ENST00000410746 298 ntBASIC4□□□□□ -1.77
SDCBPO00560 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4□□□□□ -1.77
SDCBPO00560 AC009237.10-201ENST00000414112 510 ntBASIC4□□□□□ -1.77
SDCBPO00560 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4□□□□□ -1.77
SDCBPO00560 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4□□□□□ -1.77
SDCBPO00560 VN1R37P-201ENST00000419096 748 ntBASIC4□□□□□ -1.77
SDCBPO00560 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4□□□□□ -1.77
SDCBPO00560 RPS17P8-201ENST00000434525 335 ntBASIC4□□□□□ -1.77
SDCBPO00560 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4□□□□□ -1.77
SDCBPO00560 ARL4AP3-201ENST00000441452 574 ntBASIC4□□□□□ -1.77
SDCBPO00560 SLC25A18P1-201ENST00000449385 454 ntBASIC4□□□□□ -1.77
SDCBPO00560 MYO5BP2-201ENST00000449815 1277 ntBASIC4□□□□□ -1.77
SDCBPO00560 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4□□□□□ -1.77
SDCBPO00560 RN7SL629P-201ENST00000489622 285 ntBASIC4□□□□□ -1.77
SDCBPO00560 AL671862.1-201ENST00000515851 349 ntBASIC4□□□□□ -1.77
SDCBPO00560 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SDCBPO00560 AC010424.2-201ENST00000607594 443 ntBASIC4□□□□□ -1.77
SDCBPO00560 AL353600.1-201ENST00000608148 251 ntBASIC4□□□□□ -1.77
SDCBPO00560 AC140113.4-201ENST00000622087 222 ntBASIC4□□□□□ -1.77
SDCBPO00560 AP002799.1-201ENST00000623552 423 ntBASIC4□□□□□ -1.77
SDCBPO00560 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDCBPO00560 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4□□□□□ -1.77
SDCBPO00560 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDCBPO00560 MAPK10-263ENST00000641052 4307 ntBASIC4□□□□□ -1.77
SDCBPO00560 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SDCBPO00560 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SDCBPO00560 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.99□□□□□ -1.77
SDCBPO00560 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
SDCBPO00560 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 Z95327.2-201ENST00000414579 1873 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 AL513548.1-201ENST00000562904 1724 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.99□□□□□ -1.77
SDCBPO00560 RBPJP2-201ENST00000618187 1444 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.99□□□□□ -1.77
SDCBPO00560 RNA5SP305-201ENST00000362665 119 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 RNU1-20P-201ENST00000363314 162 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 RNA5SP507-201ENST00000363603 121 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 CHMP1B2P-201ENST00000399581 597 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 AC092447.2-201ENST00000435487 669 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 BX284632.1-201ENST00000478218 541 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 AC008953.1-201ENST00000497334 318 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 RFPL4AP5-201ENST00000514977 504 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 RNU6-1334P-201ENST00000516032 105 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.99□□□□□ -1.77
SDCBPO00560 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.99□□□□□ -1.77
SDCBPO00560 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.99□□□□□ -1.77
SDCBPO00560 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 AP001521.2-201ENST00000608772 546 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 OR7M1P-201ENST00000608946 533 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 AC004232.3-201ENST00000622977 525 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC087190.4-201ENST00000574616 8334 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.99□□□□□ -1.77
SDCBPO00560 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDCBPO00560 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.99□□□□□ -1.77
SDCBPO00560 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.99□□□□□ -1.77
SDCBPO00560 EOGT-210ENST00000615922 1931 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SDCBPO00560 HSPD1P14-201ENST00000432666 1618 ntBASIC3.99□□□□□ -1.77
SDCBPO00560 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SDCBPO00560 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SDCBPO00560 MTCO1P46-201ENST00000451639 1491 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms