Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 AC117490.2-201ENST00000610042 594 ntBASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 AL049794.2-201ENST00000616301 365 ntBASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 AC091932.2-201ENST00000623014 291 ntBASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD8-MDP1E9PL57 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC015813.6-201ENST00000624409 5808 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC013442.1-201ENST00000397347 228 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 RN7SKP100-201ENST00000411258 284 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC073264.2-201ENST00000448886 166 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 SEPT7P3-201ENST00000455017 621 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC104849.1-201ENST00000462623 405 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AGGF1P3-201ENST00000493675 1213 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC098799.1-201ENST00000504752 800 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC016559.2-201ENST00000510759 359 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 GMCL1P2-201ENST00000605230 823 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 MIR6798-201ENST00000612887 67 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 AC133552.1-201ENST00000569988 4007 ntBASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD8-MDP1E9PL57 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 SNORA73.1-201ENST00000363107 205 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 RNU6-398P-201ENST00000384143 109 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 RNU6-891P-201ENST00000384280 111 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AL357515.1-201ENST00000402967 542 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 RPS16P5-201ENST00000406501 404 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 DHFRP5-201ENST00000406944 564 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 HYALP1-201ENST00000417674 1279 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AC245028.1-201ENST00000423259 256 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 OR2B7P-201ENST00000429302 934 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 SCAND3P1-201ENST00000439854 1060 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 XKRYP6-201ENST00000440468 1116 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AL138878.2-201ENST00000440581 1241 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 XKRYP3-201ENST00000442113 1116 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 TPT1P13-201ENST00000449760 499 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 OR52E3P-201ENST00000452083 936 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 NDUFA12P1-201ENST00000455914 406 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 HMGN1P8-201ENST00000463578 288 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 RPL23AP72-201ENST00000492447 435 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 NIFKP7-201ENST00000503365 834 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 RN7SKP276-201ENST00000516242 268 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 RNU6-362P-201ENST00000516736 90 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 RNA5SP392-201ENST00000516905 112 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 OR5AN2P-201ENST00000534535 896 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AP006289.1-201ENST00000538089 277 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms