Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC084754.1-201ENST00000463466 464 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC012158.1-204ENST00000483430 465 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC108022.1-201ENST00000493466 478 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC104109.1-201ENST00000498563 436 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 RNA5SP154-201ENST00000516193 111 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC112191.2-201ENST00000522428 333 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 IGKV2-4-201ENST00000523070 340 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC109635.6-201ENST00000525487 1113 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 OR8X1P-201ENST00000534542 869 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AP001496.3-201ENST00000580230 913 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC010615.3-201ENST00000597319 394 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC005520.3-201ENST00000602874 370 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC104687.2-201ENST00000604442 342 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC100767.2-201ENST00000604840 693 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC108865.2-201ENST00000606881 432 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AP005212.4-201ENST00000614206 710 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC026124.2-201ENST00000621847 656 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC012414.7-202ENST00000622705 1090 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC110792.3-201ENST00000595906 1614 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC093535.2-201ENST00000624769 2326 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AC106872.5-201ENST00000508856 1416 ntBASIC3.87□□□□□ -1.79
RBFOX3A6NFN3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AL445487.1-201ENST00000415694 1580 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 OR52B3P-201ENST00000314715 928 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 MIR375-201ENST00000362103 64 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AL512430.2-201ENST00000406786 339 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 RN7SKP216-201ENST00000411050 312 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 OR2AM1P-201ENST00000422137 422 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AC243772.1-201ENST00000451620 410 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AC144530.1-201ENST00000452862 555 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 HMGB1P4-201ENST00000455362 567 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 ATP5G1P3-201ENST00000463301 410 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AC011476.1-201ENST00000466725 307 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 Y_RNA.719-201ENST00000517156 106 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AF186190.1-201ENST00000517470 480 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 RBM22P12-201ENST00000567098 1255 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AC087783.2-201ENST00000605070 562 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AL355480.1-201ENST00000629041 99 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 AC135068.12-201ENST00000637370 931 ntBASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
RBFOX3A6NFN3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RBFOX3A6NFN3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RBFOX3A6NFN3 SMG1P6-201ENST00000532337 2930 ntBASIC3.85□□□□□ -1.79
RBFOX3A6NFN3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms