Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AC087565.3-202ENST00000642085 1603 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AC009120.2-204ENST00000621548 2032 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 RNA5SP485-201ENST00000365053 119 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 RNU6-796P-201ENST00000391086 107 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AL713922.1-201ENST00000416477 747 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AC007679.3-201ENST00000434035 414 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 ACTR3P2-201ENST00000439585 1257 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 MTND3P1-201ENST00000441336 220 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 MRPL35P2-201ENST00000448009 511 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AC093870.1-201ENST00000506837 213 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 MTCO2P4-201ENST00000517968 247 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AL078601.3-201ENST00000573303 535 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 POLR3GP2-201ENST00000588366 668 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 DYNLL1P1-201ENST00000595442 269 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AL158209.2-201ENST00000619266 216 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AL591848.4-201ENST00000567832 3472 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AC020658.2-201ENST00000559030 4020 ntBASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 TEK-202ENST00000406359 3935 ntTSL 2 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PDZRN3Q9UPQ7 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 ICE2P1-201ENST00000512800 1849 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 SMG1P5-202ENST00000529428 4219 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 SMG1P2-201ENST00000566127 4221 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 NACA3P-201ENST00000359690 648 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 CBX3P6-201ENST00000430257 527 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AL590128.1-201ENST00000433407 286 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC092106.2-201ENST00000436597 487 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 BZW1P1-201ENST00000454901 1240 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 H3F3AP5-201ENST00000475267 429 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 RPS29P25-201ENST00000481709 171 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AP005597.4-201ENST00000526762 229 ntBASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC8.5□□□□□ -1.05
PDZRN3Q9UPQ7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms