Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC002525.1-201ENST00000624392 1622 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 ECM1P2-201ENST00000503354 1577 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AMZ2P2-201ENST00000406819 1057 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 PCNPP4-201ENST00000414817 517 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 ARAFP1-201ENST00000422172 605 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 SUMO2P1-206ENST00000445436 284 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 ENPP7P11-201ENST00000505915 627 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC021006.3-201ENST00000530771 192 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC074029.2-201ENST00000551045 634 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC106785.3-201ENST00000564064 847 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC010547.7-201ENST00000570323 333 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AP002884.5-201ENST00000595053 1132 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AL445528.2-201ENST00000620582 470 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AL353662.3-201ENST00000625131 237 ntBASIC5.34□□□□□ -1.55
SIX4Q9UIU6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SIX4Q9UIU6 NAMPTP1-201ENST00000440465 2514 ntBASIC5.34□□□□□ -1.56
SIX4Q9UIU6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.34□□□□□ -1.56
SIX4Q9UIU6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SIX4Q9UIU6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
SIX4Q9UIU6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
SIX4Q9UIU6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 DDX6P1-205ENST00000441966 1436 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AL929601.4-201ENST00000613011 1341 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 MIR550A3-201ENST00000390735 95 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 Z97832.1-201ENST00000402490 328 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 PTGES3P2-201ENST00000407942 482 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 TXNP2-201ENST00000443918 295 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 RPL31P44-201ENST00000447680 377 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC245028.2-201ENST00000458673 253 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC018635.1-201ENST00000468292 1030 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 IGLV2-34-201ENST00000490007 283 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC027338.1-201ENST00000514840 825 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 MORF4L1P3-201ENST00000525966 950 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AP001922.4-201ENST00000526967 290 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC027281.1-201ENST00000574178 758 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC087783.2-201ENST00000605070 562 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AL022394.1-201ENST00000606979 292 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AL355802.4-201ENST00000607635 548 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC087565.3-202ENST00000642085 1603 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms