Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC107027.3-201ENST00000565095 3473 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 MFSD8-239ENST00000641590 2479 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC111188.2-201ENST00000529697 1387 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRFN1Q9P244 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRFN1Q9P244 OR52E6-202ENST00000379946 954 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 MIR143-201ENST00000385300 106 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC015977.1-201ENST00000418887 292 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC114814.2-201ENST00000419195 485 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC027644.1-201ENST00000419595 298 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRFN1Q9P244 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRFN1Q9P244 HMGB1P45-201ENST00000435986 653 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 RPS12P17-201ENST00000438591 377 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC091959.2-201ENST00000477363 321 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 RPL21P131-201ENST00000497298 483 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 RNA5SP362-201ENST00000516048 118 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 SNORA43.3-201ENST00000517240 103 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 MTND1P24-201ENST00000552175 861 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC115085.1-201ENST00000588924 229 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 SDR42E1P1-201ENST00000611327 477 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 VN1R74P-201ENST00000613259 503 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRFN1Q9P244 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 VN1R7P-201ENST00000619242 903 ntBASIC5.34□□□□□ -1.55
LRFN1Q9P244 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRFN1Q9P244 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRFN1Q9P244 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.34□□□□□ -1.55
LRFN1Q9P244 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.56
LRFN1Q9P244 AC090017.1-201ENST00000548612 1779 ntBASIC5.34□□□□□ -1.56
LRFN1Q9P244 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRFN1Q9P244 AC015799.1-201ENST00000622996 3122 ntBASIC5.34□□□□□ -1.56
LRFN1Q9P244 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.34□□□□□ -1.56
LRFN1Q9P244 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LRFN1Q9P244 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC140134.1-201ENST00000511830 3544 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 ZNF29P-201ENST00000225587 168 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC093719.1-202ENST00000392735 373 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 MIR1178-201ENST00000408396 91 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 BTF3P8-201ENST00000414577 526 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AL449283.1-202ENST00000418249 604 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AL662874.1-201ENST00000426065 230 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 NPM1P24-201ENST00000428039 894 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 OR10R1P-201ENST00000441524 1141 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 EEF1B2P6-201ENST00000445713 673 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 RSU1P1-201ENST00000453416 441 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 RPL37P3-201ENST00000456825 293 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 RPS23P6-201ENST00000466136 431 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AL157777.1-201ENST00000468100 304 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC006539.1-201ENST00000481419 501 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC073522.1-201ENST00000483312 377 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 ATP5LP3-201ENST00000514223 304 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 RNU6-615P-201ENST00000516065 106 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 MIR2117-201ENST00000516780 80 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 IGJP1-201ENST00000522682 475 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 OR10V3P-201ENST00000525712 725 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC006116.5-201ENST00000591936 559 ntBASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.33□□□□□ -1.56
LRFN1Q9P244 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms