Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AP005432.2-201ENST00000608162 586 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 MIR6861-201ENST00000618657 64 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 OR51H2P-202ENST00000641424 3046 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 NAMPTP1-201ENST00000440465 2514 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC093775.1-201ENST00000624154 1868 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 RN7SKP171-201ENST00000364417 303 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 RNA5SP122-201ENST00000384457 108 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 SNORA66-201ENST00000384792 133 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 MIR195-201ENST00000385194 87 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC096644.3-201ENST00000416788 338 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC004690.1-201ENST00000418216 328 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AJ239321.1-201ENST00000424255 564 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 CR848007.2-201ENST00000424918 787 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 RPS4XP16-201ENST00000427198 791 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AP000949.1-201ENST00000438328 629 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 RPS29P9-201ENST00000440360 171 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AL133445.1-201ENST00000467051 452 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 SIAH1P1-201ENST00000479411 923 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 MTND1P36-201ENST00000522384 936 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 OR8K2P-201ENST00000524645 927 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC125612.1-201ENST00000547580 377 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC090079.2-201ENST00000575289 768 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC091979.2-201ENST00000607514 214 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC092953.2-201ENST00000608000 699 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 FO681491.1-202ENST00000623392 737 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NDE1Q9NXR1 MTND4P21-201ENST00000453886 1357 ntBASIC4.78□□□□□ -1.64
NDE1Q9NXR1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
NDE1Q9NXR1 AC007382.1-201ENST00000624376 2618 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 OR52B3P-201ENST00000314715 928 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 RNU6-1331P-201ENST00000363658 106 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 RN7SKP269-201ENST00000365545 319 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AL353625.1-202ENST00000366273 571 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 GAPDHP15-201ENST00000398586 975 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 MIR1182-201ENST00000408363 97 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 MIR1282-201ENST00000408865 101 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 PPIAP13-201ENST00000434706 478 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 RPS15AP29-201ENST00000445539 400 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 HMGB1P4-201ENST00000455362 567 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.77□□□□□ -1.65
NDE1Q9NXR1 RPL23AP65-201ENST00000475608 468 ntBASIC4.77□□□□□ -1.65
NDE1Q9NXR1 AC104971.1-201ENST00000495117 578 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms