Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC087477.6-201ENST00000559595 843 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 RN7SL435P-201ENST00000584418 282 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC093799.2-201ENST00000610062 578 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC009704.2-201ENST00000618739 483 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC015871.5-202ENST00000623252 701 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC008758.3-201ENST00000507003 1829 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AL078599.1-201ENST00000402075 293 ntBASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 RPS16P5-201ENST00000406501 404 ntBASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 RPL31P44-201ENST00000447680 377 ntBASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 RN7SKP147-201ENST00000517154 244 ntBASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AL049839.1-201ENST00000556151 657 ntBASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 MIR3936-201ENST00000584304 110 ntBASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPF3BQ9BZI7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 DDX18P5-201ENST00000534547 1306 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC091153.1-201ENST00000466297 402 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 SUMO2P4-201ENST00000504193 276 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 SS18L2P2-201ENST00000583960 235 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC011487.3-201ENST00000593607 453 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC234771.5-201ENST00000600161 514 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AL356752.1-201ENST00000615844 593 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 OR8G7P-201ENST00000616658 848 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC015804.1-201ENST00000622935 435 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC016717.3-201ENST00000624730 554 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 XKRY2-202ENST00000623874 1581 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 XKRY-202ENST00000624960 1581 ntBASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UPF3BQ9BZI7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AL731566.1-201ENST00000620490 1937 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms