Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC139713.2-215ENST00000641428 5037 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 RNU4-23P-201ENST00000362839 140 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC002524.1-201ENST00000411687 547 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 Z85994.2-201ENST00000434327 452 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 RPS26P2-201ENST00000440331 348 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AURKAPS1-201ENST00000451805 1212 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 RN7SL319P-201ENST00000480656 221 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 OR11I1P-201ENST00000486033 954 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC072052.1-201ENST00000496556 306 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC104109.1-201ENST00000498563 436 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 IGKV2-18-201ENST00000522607 343 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AP000859.1-201ENST00000525536 307 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC079075.1-201ENST00000559543 878 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 FAM60CP-201ENST00000591086 664 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 MEMO1P5-201ENST00000604810 406 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AL133406.3-201ENST00000606817 541 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AL512329.2-201ENST00000607350 548 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 SNORD91B-202ENST00000608459 222 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AF117829.2-201ENST00000619538 361 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC008115.4-201ENST00000619780 775 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 MAPK10-349ENST00000641767 3661 ntBASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HDHD3Q9BSH5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 MTHFD2P5-201ENST00000320415 844 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 MIR143-201ENST00000385300 106 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 DHFRP5-201ENST00000406944 564 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 U3.36-201ENST00000408418 213 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AL034379.1-201ENST00000423216 253 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC079807.1-201ENST00000429993 481 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AL451139.1-201ENST00000434718 346 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 RN7SL174P-201ENST00000475578 289 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC090114.3-201ENST00000479267 829 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC130352.1-201ENST00000602979 661 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC010424.2-201ENST00000607594 443 ntBASIC4.03□□□□□ -1.76
HDHD3Q9BSH5 AC097505.1-201ENST00000610199 565 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms