Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 AC055764.2-201ENST00000610089 670 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX3Q99909 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX3Q99909 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 AC020923.1-201ENST00000624021 917 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SSX3Q99909 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX3Q99909 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SSX3Q99909 AC007938.2-201ENST00000604666 2634 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SSX3Q99909 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSX3Q99909 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX3Q99909 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX3Q99909 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX3Q99909 AC092681.1-201ENST00000297369 291 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 RNA5SP131-201ENST00000365452 119 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX3Q99909 RNU1-136P-201ENST00000384181 164 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 AL596448.1-201ENST00000415024 392 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX3Q99909 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX3Q99909 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 AC009965.2-201ENST00000425328 970 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX3Q99909 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX3Q99909 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX3Q99909 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 DUTP1-201ENST00000493631 470 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SSX3Q99909 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.57□□□□□ -1.68
SSX3Q99909 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 AC007225.2-201ENST00000562529 256 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AC021483.2-201ENST00000567415 758 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 AC015849.2-201ENST00000605738 409 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AC011472.4-201ENST00000615848 491 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AC025016.1-201ENST00000616746 682 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 MIR6886-201ENST00000619864 61 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AC007342.8-201ENST00000623278 678 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AL356094.1-201ENST00000624663 1212 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX3Q99909 AL596275.2-204ENST00000641628 552 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 AL596275.2-206ENST00000641957 626 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX3Q99909 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX3Q99909 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SSX3Q99909 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX3Q99909 AC104964.3-201ENST00000606115 2860 ntBASIC4.57□□□□□ -1.68
SSX3Q99909 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SSX3Q99909 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX3Q99909 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.56□□□□□ -1.68
SSX3Q99909 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.56□□□□□ -1.68
SSX3Q99909 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 AL445437.1-201ENST00000623157 3087 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 OR9K1P-201ENST00000326513 941 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSX3Q99909 RN7SKP124-201ENST00000364730 341 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 UBBP2-201ENST00000376781 231 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 MIR130A-201ENST00000385274 89 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 CHMP1B2P-201ENST00000399581 597 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 GAPDHP42-201ENST00000406848 981 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 USP9YP19-201ENST00000412165 485 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AC092570.3-201ENST00000420113 693 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.56□□□□□ -1.68
SSX3Q99909 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 AL133173.1-201ENST00000423458 397 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX3Q99909 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.56□□□□□ -1.68
SSX3Q99909 HMGB3P9-201ENST00000441799 583 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AC007000.2-201ENST00000442564 487 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms