Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MTND1P30-201ENST00000441241 901 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 TRIM60P16-201ENST00000444048 694 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 COX6CP2-201ENST00000444980 225 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 MGAT2P1-201ENST00000449718 797 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 KATNBL1P6-201ENST00000453433 915 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC023141.9-201ENST00000458734 412 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 MTCO3P38-201ENST00000468910 766 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC011979.1-201ENST00000472300 483 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 snoZ278.1-201ENST00000517059 112 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC007954.1-201ENST00000554198 494 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 RPS3AP4-201ENST00000555161 764 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AL592148.2-201ENST00000612210 372 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC015922.4-201ENST00000612568 690 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC012254.5-201ENST00000623573 478 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 MAPK10-287ENST00000641217 3037 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 OR52B3P-201ENST00000314715 928 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 OR9K1P-201ENST00000326513 941 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 OR11H13P-201ENST00000359695 979 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 RNU6-797P-201ENST00000363101 109 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 RN7SKP292-201ENST00000365522 317 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 RNU6-31P-201ENST00000384388 108 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 RNU6-253P-201ENST00000384730 105 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 MIR143-201ENST00000385300 106 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AL391361.1-201ENST00000405580 489 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC007899.1-201ENST00000412776 775 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC023128.2-201ENST00000420880 1223 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AL590103.1-201ENST00000434488 307 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 RPSAP39-201ENST00000467439 883 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC092865.4-201ENST00000477936 615 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 RN7SL193P-201ENST00000491708 276 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 FABP5P5-201ENST00000515537 406 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 Y_RNA.710-201ENST00000516975 110 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC009120.3-201ENST00000563335 499 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AP005119.1-201ENST00000580956 292 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC090181.2-201ENST00000602975 672 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC018618.2-201ENST00000604770 446 ntBASIC7.03□□□□□ -1.28
SYNGAP1Q96PV0 AC090186.1-201ENST00000605991 572 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms