Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 SALL4P2-201ENST00000423288 2910 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL21A1Q96P44 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL21A1Q96P44 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 RNU6-167P-201ENST00000384292 106 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 SNORA70-201ENST00000384436 135 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 CHMP1B2P-201ENST00000399581 597 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 AP000580.1-201ENST00000404439 358 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 AL034379.1-201ENST00000423216 253 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 FABP7P2-201ENST00000429946 379 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 RPL7AP6-201ENST00000477943 801 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC234775.3-201ENST00000564612 656 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL21A1Q96P44 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC139713.2-215ENST00000641428 5037 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL21A1Q96P44 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AC097461.1-201ENST00000568928 2821 ntBASIC4.64□□□□□ -1.67
COL21A1Q96P44 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL21A1Q96P44 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL21A1Q96P44 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL21A1Q96P44 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL21A1Q96P44 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 RNU4-4P-201ENST00000364588 130 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL21A1Q96P44 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 RNU2-22P-201ENST00000411266 212 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 GJA6P-201ENST00000415117 1042 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 RPL34P20-201ENST00000442771 351 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 IGHV5-78-201ENST00000450948 295 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 RPS17P2-201ENST00000461663 408 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC044860.2-201ENST00000561005 179 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 CYCSP40-201ENST00000575927 294 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 MIR4691-201ENST00000583764 85 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 QTRT1P1-201ENST00000604344 1078 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 AL021707.7-201ENST00000607991 416 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC211433.2-201ENST00000608433 387 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 AL627230.1-201ENST00000613077 211 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 AL356752.1-201ENST00000615844 593 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 AL591926.8-201ENST00000616876 211 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 MIR6730-201ENST00000622213 67 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 MIR6719-201ENST00000622428 87 ntBASIC4.63□□□□□ -1.67
COL21A1Q96P44 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL21A1Q96P44 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.63□□□□□ -1.67
COL21A1Q96P44 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 Z95327.2-201ENST00000414579 1873 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 RNA5SP443-201ENST00000363083 132 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 ATP5HP3-201ENST00000396994 486 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 AL356968.2-201ENST00000412769 1257 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 NFYAP1-201ENST00000431953 972 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms