Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RN7SKP34-201ENST00000516142 244 ntBASIC5.13□□□□□ -1.59
RPRD1AQ96P16 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 TVP23CP2-201ENST00000571473 623 ntBASIC5.13□□□□□ -1.59
RPRD1AQ96P16 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 SNORA35B-201ENST00000607417 129 ntBASIC5.13□□□□□ -1.59
RPRD1AQ96P16 BX323046.1-201ENST00000610145 535 ntBASIC5.13□□□□□ -1.59
RPRD1AQ96P16 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 MIR6730-201ENST00000622213 67 ntBASIC5.13□□□□□ -1.59
RPRD1AQ96P16 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.13□□□□□ -1.59
RPRD1AQ96P16 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 MIR550A3-201ENST00000390735 95 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 RN7SKP247-201ENST00000411094 308 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC098592.2-201ENST00000413158 265 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AL590762.4-201ENST00000425885 253 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 PA2G4P6-201ENST00000438325 1197 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 RPL7AP61-201ENST00000443410 636 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC112498.1-201ENST00000444401 332 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 HIGD1AP8-201ENST00000453927 274 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC008033.2-201ENST00000542626 177 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 EDDM3DP-201ENST00000554692 434 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC099654.2-201ENST00000433031 1980 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 IRF5P1-201ENST00000504852 2164 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC005332.5-201ENST00000591222 2919 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 AC104623.2-202ENST00000623477 4002 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 SMG1P4-204ENST00000523028 4131 ntBASIC5.12□□□□□ -1.59
RPRD1AQ96P16 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.12□□□□□ -1.59
RPRD1AQ96P16 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC004817.4-201ENST00000602396 3625 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 THAP12P5-201ENST00000405864 2275 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 SNORA73.1-201ENST00000363107 205 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 RN7SKP16-201ENST00000410180 299 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 COX6B1P1-201ENST00000415962 213 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC013429.2-201ENST00000418798 781 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 RPS26P13-201ENST00000419030 330 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 BTG3P1-201ENST00000435859 716 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 RPL7P11-201ENST00000437586 658 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 CYCSP24-201ENST00000445119 316 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AL591363.1-201ENST00000450091 483 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC093166.2-201ENST00000455969 1017 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC245028.2-201ENST00000458673 253 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 COX6B1P2-201ENST00000489624 230 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 ENPP7P11-201ENST00000505915 627 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 BTF3P13-201ENST00000513224 490 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 MIR3934-201ENST00000579806 107 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC127024.5-201ENST00000580085 462 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC024940.4-201ENST00000605507 246 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AL008729.2-201ENST00000606393 473 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AL049794.2-201ENST00000616301 365 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AL445528.2-201ENST00000620582 470 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 AC087821.1-201ENST00000623639 567 ntBASIC5.11□□□□□ -1.59
RPRD1AQ96P16 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.11□□□□□ -1.59
RPRD1AQ96P16 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPRD1AQ96P16 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPRD1AQ96P16 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms