Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 OR52B5P-202ENST00000641118 1110 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC004817.4-201ENST00000602396 3625 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC011493.1-201ENST00000596753 1632 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 RNU4-39P-201ENST00000362455 127 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 BMS1P3-201ENST00000372011 932 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 RNU4-31P-201ENST00000384211 141 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AL512430.2-201ENST00000406786 339 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 RN7SKP206-201ENST00000410823 293 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AL389925.1-201ENST00000432257 728 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 TRIM60P13-201ENST00000432350 1283 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 MRPL35P2-201ENST00000448009 511 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 EIF4A1P11-201ENST00000451239 222 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 OR2AO1P-201ENST00000476497 403 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC093890.1-201ENST00000502554 540 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 RPL23AP53-201ENST00000521854 457 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC107918.3-201ENST00000533272 382 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC012146.2-201ENST00000576545 416 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC011840.5-201ENST00000582125 771 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC015908.5-201ENST00000623289 343 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 PHKBP1-201ENST00000450951 1951 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AL445437.1-201ENST00000623157 3087 ntBASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM5Q96HC4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 RNU4-44P-201ENST00000363050 141 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC013442.1-201ENST00000397347 228 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 MIR1286-201ENST00000408112 78 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 RPS26P47-201ENST00000427219 348 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 HNRNPA3P4-201ENST00000427514 803 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 MTND2P21-201ENST00000436242 1042 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 ELOCP10-201ENST00000440624 327 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 AL391987.1-201ENST00000441025 200 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 HMGB1P4-201ENST00000455362 567 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC091180.1-201ENST00000462104 372 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 RN7SL515P-201ENST00000463999 297 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 SUMO1P1-201ENST00000497904 306 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC008083.2-201ENST00000546707 476 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC116553.2-201ENST00000564203 463 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms