Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 FRG1EP-201ENST00000634469 770 ntBASIC5.32□□□□□ -1.56
HDAC11Q96DB2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AC133552.1-201ENST00000569988 4007 ntBASIC5.32□□□□□ -1.56
HDAC11Q96DB2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.32□□□□□ -1.56
HDAC11Q96DB2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 RPL21P67-201ENST00000402896 478 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 MIR1182-201ENST00000408363 97 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 RPL26P37-201ENST00000411983 438 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 RPL35AP24-201ENST00000413846 330 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 PCNPP4-201ENST00000414817 517 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 RPA2P2-201ENST00000419698 796 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 OR52B5P-201ENST00000435337 951 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AL589765.3-201ENST00000446084 462 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 RN7SL515P-201ENST00000463999 297 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 COPS8P2-201ENST00000473228 627 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC037198.2-201ENST00000478845 733 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 HMGB1P3-201ENST00000502802 616 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC100784.1-201ENST00000522790 310 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AP003168.1-201ENST00000530091 307 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC134349.2-201ENST00000535136 910 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AL390726.5-202ENST00000564800 256 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 MIR4675-201ENST00000577898 77 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC068020.1-201ENST00000594215 661 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC130352.1-201ENST00000602979 661 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC021106.3-201ENST00000623925 531 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 OR52B5P-202ENST00000641118 1110 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC017002.4-201ENST00000604721 1525 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 NXF4-202ENST00000416098 1465 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 AC104260.2-201ENST00000623551 3497 ntBASIC5.31□□□□□ -1.56
HDAC11Q96DB2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HDAC11Q96DB2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 AC235565.1-201ENST00000456962 1325 ntBASIC5.3□□□□□ -1.56
HDAC11Q96DB2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 FAR1P1-201ENST00000427163 934 ntBASIC5.3□□□□□ -1.56
HDAC11Q96DB2 AL772161.1-201ENST00000439130 476 ntBASIC5.3□□□□□ -1.56
HDAC11Q96DB2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 UBA52P7-201ENST00000486088 380 ntBASIC5.3□□□□□ -1.56
HDAC11Q96DB2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC11Q96DB2 RFPL4AP5-201ENST00000514977 504 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms