Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HPS3Q969F9 RNU6-185P-201ENST00000384421 107 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HPS3Q969F9 PPIAP9-201ENST00000403866 498 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 RN7SKP229-201ENST00000410465 302 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 BMS1P17-202ENST00000416720 316 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 USP9YP21-201ENST00000420603 432 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.08□□□□□ -1.44
HPS3Q969F9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 CHEK2P5-201ENST00000423877 246 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.08□□□□□ -1.44
HPS3Q969F9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.08□□□□□ -1.44
HPS3Q969F9 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 AL450996.1-201ENST00000445574 1202 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 EIF2S2P2-201ENST00000447161 982 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 SEPT14P24-201ENST00000447236 180 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 IGBP1P3-201ENST00000447449 1000 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 NPM1P19-201ENST00000450070 712 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AL035407.2-201ENST00000454090 378 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 RPL7P32-201ENST00000457119 744 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 SNORD11.1-201ENST00000459482 85 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 RPL6P9-201ENST00000466502 859 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 RPSAP51-201ENST00000497462 645 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC021146.5-201ENST00000503544 545 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.08□□□□□ -1.44
HPS3Q969F9 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 OR5AK3P-201ENST00000527486 1297 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC027026.1-201ENST00000532323 742 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 IGBP1P1-201ENST00000554337 1009 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AL049872.1-201ENST00000556323 322 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.08□□□□□ -1.44
HPS3Q969F9 MIR4505-201ENST00000582238 73 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.08□□□□□ -1.44
HPS3Q969F9 AC012616.1-201ENST00000600294 197 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC098935.2-201ENST00000604222 466 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC009974.1-201ENST00000608881 455 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC004232.3-201ENST00000622977 525 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC097655.1-201ENST00000635075 318 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.08□□□□□ -1.44
HPS3Q969F9 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.08□□□□□ -1.44
HPS3Q969F9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.07□□□□□ -1.44
HPS3Q969F9 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HPS3Q969F9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC100757.1-201ENST00000616872 1835 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 RNU6-236P-201ENST00000363886 106 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 RPL23AP59-201ENST00000399415 461 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 OR51B3P-201ENST00000412287 913 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.07□□□□□ -1.44
HPS3Q969F9 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 RPL5P2-201ENST00000429598 854 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 MTCO1P52-201ENST00000433928 531 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 USP9YP24-201ENST00000434374 697 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AC012075.1-201ENST00000436549 580 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 RPL12P18-201ENST00000437175 325 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AL353093.1-201ENST00000441292 436 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 ELOCP13-201ENST00000443934 329 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 USP9YP17-201ENST00000444617 696 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AL161636.2-201ENST00000445179 927 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.07□□□□□ -1.44
HPS3Q969F9 TRY2P-201ENST00000448860 689 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AL035090.1-201ENST00000454835 332 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 RANP1-206ENST00000455094 651 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AC074386.1-201ENST00000476560 767 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC020699.1-201ENST00000505161 445 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 RNU6-1028P-201ENST00000517164 93 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 SEPT10P1-201ENST00000517342 1162 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.07□□□□□ -1.44
HPS3Q969F9 OR10V3P-201ENST00000525712 725 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms