Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AC097499.1-201ENST00000444277 208 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 RPL34P26-201ENST00000445636 354 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 RSU1P1-201ENST00000453416 441 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 DUXAP8-207ENST00000456786 622 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 OR7E13P-201ENST00000526052 910 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 OR5D15P-201ENST00000531671 942 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AC127381.1-201ENST00000555979 939 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 RN7SL622P-201ENST00000585292 275 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 DUXAP10-204ENST00000612052 616 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AC140134.1-201ENST00000511830 3544 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 OR55B1P-203ENST00000641518 2602 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RNU6-666P-201ENST00000363499 107 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 GNG5P2-201ENST00000372054 207 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 MIR142-201ENST00000384835 87 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AL136131.1-201ENST00000406079 803 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RN7SKP126-201ENST00000411143 300 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RN7SKP279-201ENST00000411383 298 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AL445213.1-201ENST00000412589 747 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RNGTTP1-201ENST00000420965 728 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 MTCO1P52-201ENST00000433928 531 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 Z80107.2-201ENST00000445127 392 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AL672138.1-201ENST00000450604 1015 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 BX284632.1-201ENST00000478218 541 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC096571.1-202ENST00000506634 735 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 OR8G3P-201ENST00000533406 921 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC006116.5-201ENST00000591936 559 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AL022067.1-201ENST00000602426 454 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 OR2BH1P-201ENST00000608850 864 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC063944.3-201ENST00000609969 533 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC011472.4-201ENST00000615848 491 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AL669942.2-201ENST00000620352 697 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 MTCO1P18-201ENST00000455518 1419 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 BCORP1-203ENST00000513194 5093 ntBASIC5.47□□□□□ -1.53
HMGB4Q8WW32 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms