Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 RN7SKP224-201ENST00000364140 325 ntBASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 RNU6-761P-201ENST00000384148 107 ntBASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 RPS3AP54-201ENST00000435535 734 ntBASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 RPL23AP53-201ENST00000521854 457 ntBASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 SNX18P1Y-201ENST00000616231 511 ntBASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC7.41□□□□□ -1.22
CFAP43Q8NDM7 AC135352.1-201ENST00000506173 1418 ntBASIC7.4□□□□□ -1.22
CFAP43Q8NDM7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CFAP43Q8NDM7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CFAP43Q8NDM7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.4□□□□□ -1.22
CFAP43Q8NDM7 AC002525.1-201ENST00000624392 1622 ntBASIC7.4□□□□□ -1.22
CFAP43Q8NDM7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 RNA5SP317-201ENST00000410176 116 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 RN7SKP267-201ENST00000410381 285 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 RNA5SP311-201ENST00000411290 116 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 RPS12P10-201ENST00000427031 377 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 RPL34P6-201ENST00000432390 345 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 RNA5SP315-201ENST00000516340 116 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 RNA5SP312-201ENST00000517068 116 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 AC005868.1-201ENST00000536421 331 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 BNIP3P11-201ENST00000603878 563 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 AC006453.5-201ENST00000636451 619 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 STX3-208ENST00000641815 3236 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 AC093297.3-201ENST00000607056 2517 ntBASIC7.4□□□□□ -1.23
CFAP43Q8NDM7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 AC025574.1-201ENST00000554784 1653 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 AL161912.2-201ENST00000565707 3007 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 SNORA5.1-201ENST00000384275 131 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 MIR659-201ENST00000384963 97 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 AL022722.2-201ENST00000402519 180 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 AL162591.2-201ENST00000449634 317 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 RN7SL558P-201ENST00000497468 299 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 NPM1P5-201ENST00000557228 838 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 CYCSP40-201ENST00000575927 294 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 AC090948.2-201ENST00000607363 564 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 AL445567.2-201ENST00000618935 498 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CFAP43Q8NDM7 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC104333.2-201ENST00000422630 192 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 RHEBP2-201ENST00000450289 600 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 SAP18P1-201ENST00000512058 390 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 RN7SKP280-201ENST00000364196 304 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 SNORA71.2-201ENST00000364941 134 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC105031.1-201ENST00000518550 476 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 MIR4298-201ENST00000584380 73 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AL035461.2-201ENST00000619201 524 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 AC112200.1-201ENST00000625015 234 ntBASIC7.38□□□□□ -1.23
CFAP43Q8NDM7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.37□□□□□ -1.23
CFAP43Q8NDM7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CFAP43Q8NDM7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CFAP43Q8NDM7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms