Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 MTCO3P2-201ENST00000457365 171 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 RN7SL180P-201ENST00000466769 294 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 RPL7AP56-201ENST00000476420 791 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 RPSAP51-201ENST00000497462 645 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 NACAP6-201ENST00000509572 622 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 RNU6-835P-201ENST00000516974 104 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 IGLVI-42-201ENST00000522485 381 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC008127.2-201ENST00000549925 1075 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC016629.2-201ENST00000597341 199 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AL451085.1-201ENST00000604546 690 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AL133351.5-201ENST00000612789 106 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 PFN1P2-202ENST00000621347 397 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 MIR6723-201ENST00000621981 89 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC010149.2-201ENST00000637608 315 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC022507.1-201ENST00000548349 1505 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC092162.3-201ENST00000624511 1624 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 Y_RNA.326-201ENST00000365176 113 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AL356432.1-201ENST00000405809 419 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 GAPDHP42-201ENST00000406848 981 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 RBMY2GP-201ENST00000418671 1034 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC130472.1-201ENST00000427885 309 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 RBMY2NP-201ENST00000434454 1028 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 CEACAMP5-201ENST00000448037 961 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AL513533.1-201ENST00000453728 415 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC093278.1-201ENST00000494700 600 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 ADI1P2-201ENST00000514945 429 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 RN7SKP14-201ENST00000516000 329 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 SOD1P3-201ENST00000518682 454 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AP003072.2-201ENST00000527756 676 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC244034.2-201ENST00000562504 509 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AL109918.2-201ENST00000605188 279 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms