Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 U3.4-201ENST00000363352 213 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AL663109.1-201ENST00000411498 844 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 NRBF2P2-201ENST00000413087 861 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 RPL35AP31-201ENST00000418340 337 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 CNOT7P1-201ENST00000429006 852 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 DEFA9P-201ENST00000433042 285 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 GTF2IP7-202ENST00000436677 309 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC023141.3-201ENST00000436698 278 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 EIF5AP4-201ENST00000441206 465 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 HMGN1P2-201ENST00000445197 310 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 FAR2P1-206ENST00000449736 709 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC079776.3-201ENST00000450665 370 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 PPIAP27-201ENST00000453800 265 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC128716.1-201ENST00000475129 166 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 RPL7P16-201ENST00000479738 738 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC113430.1-201ENST00000506872 718 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC104108.1-201ENST00000509930 412 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 LTV1P1-201ENST00000510683 1237 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC010587.2-201ENST00000511727 448 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 RN7SKP238-201ENST00000516483 249 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC083923.1-201ENST00000523708 376 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 GTF2IP11-201ENST00000526931 420 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 RPA2P3-201ENST00000533268 770 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC068944.2-201ENST00000610373 403 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AL138960.1-201ENST00000613838 513 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC004836.1-201ENST00000623032 634 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC022400.9-201ENST00000623633 273 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC003992.1-201ENST00000635364 557 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AP002833.3-201ENST00000625075 2265 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 AL078595.2-201ENST00000605309 1780 ntBASIC6.01□□□□□ -1.45
TRIM48Q8IWZ4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AC006600.2-201ENST00000624834 2506 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AC092111.2-201ENST00000611627 1414 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AL137100.1-201ENST00000556703 1620 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AP003170.5-201ENST00000397185 335 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 SLC9B1P2-201ENST00000398120 1184 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 RN7SKP142-201ENST00000411236 328 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 RNU6-575P-201ENST00000411326 105 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 PGBD4P8-201ENST00000412993 562 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AL034379.1-201ENST00000423216 253 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 OR5W1P-201ENST00000423705 938 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AL022400.1-201ENST00000423946 935 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 NANOGP4-201ENST00000427230 913 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AL022331.1-201ENST00000429025 477 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 MTCO1P3-201ENST00000429327 192 ntBASIC6□□□□□ -1.45
TRIM48Q8IWZ4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM48Q8IWZ4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms