Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 CEACAMP8-201ENST00000413902 580 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 DDX39BP1-205ENST00000422507 192 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 SCAND3P1-201ENST00000439854 1060 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC106872.4-201ENST00000510050 523 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AL358913.1-201ENST00000554342 121 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC004825.1-201ENST00000555068 586 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 RPL21P7-201ENST00000557463 483 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC104687.2-201ENST00000604442 342 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC005377.1-201ENST00000605126 456 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 TLK1P1-201ENST00000456760 2440 ntBASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC50Q8IVM0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC50Q8IVM0 NXF4-202ENST00000416098 1465 ntBASIC5.15□□□□□ -1.58
CCDC50Q8IVM0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC50Q8IVM0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC50Q8IVM0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC50Q8IVM0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 RNA5SP372-201ENST00000390836 115 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 OR7E125P-201ENST00000443450 846 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AC097484.1-201ENST00000471148 389 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 HMGN2P25-201ENST00000486956 268 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AP001960.1-201ENST00000506494 658 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 ATP5LP3-201ENST00000514223 304 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 AC012414.7-202ENST00000622705 1090 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 DDX18P5-201ENST00000534547 1306 ntBASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC50Q8IVM0 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 DHX9P1-201ENST00000436565 3076 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 RNA5SP455-201ENST00000365190 119 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AL136116.2-201ENST00000404020 785 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AL391361.1-201ENST00000405580 489 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 MIR1286-201ENST00000408112 78 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC079355.1-201ENST00000421770 223 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 EIF4EP1-201ENST00000422311 642 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 NFYAP1-201ENST00000431953 972 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 NMNAT1P2-201ENST00000435192 860 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 RPL34P20-201ENST00000442771 351 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 MRPL48P1-201ENST00000445390 636 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 KNOP1P3-201ENST00000446933 426 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AL389915.2-201ENST00000454576 441 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 RN7SL244P-201ENST00000493405 297 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC072052.1-201ENST00000496556 306 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 COX6B1P5-201ENST00000509843 249 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms