Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 YWHAZP1-201ENST00000556286 722 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 NMNAT1P5-201ENST00000559657 841 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC023825.1-201ENST00000566704 1030 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC010735.1-201ENST00000567305 1026 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 MIR4311-201ENST00000580794 100 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 ZNF92P3-201ENST00000596594 954 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC011492.1-201ENST00000600023 315 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AL031601.1-201ENST00000605702 394 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AP005431.1-201ENST00000618479 319 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 MIR1910-201ENST00000636955 80 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC38Q502W7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC38Q502W7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC38Q502W7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC38Q502W7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 TTC39DP-201ENST00000416781 1688 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 IGKV7-3-201ENST00000357453 298 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 RNU1-146P-201ENST00000364015 165 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 RNA5SP30-201ENST00000365552 115 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 RPL23AP59-201ENST00000399415 461 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 HMGB3P18-201ENST00000406327 590 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 RMRPP5-201ENST00000411156 267 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC048351.1-201ENST00000420064 602 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC241520.1-201ENST00000422654 1099 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC127526.2-201ENST00000426436 775 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 RPL7P29-201ENST00000437151 728 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 IGBP1P3-201ENST00000447449 1000 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AP006222.1-205ENST00000450734 457 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AL035407.2-201ENST00000454090 378 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AZGP1P2-201ENST00000454506 345 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 DUTP7-201ENST00000507982 486 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC021193.1-201ENST00000511607 420 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 RN7SKP157-201ENST00000516174 282 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC127024.5-201ENST00000580085 462 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC063977.5-201ENST00000601044 974 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC015982.1-201ENST00000608113 465 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC055764.2-201ENST00000610089 670 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 RNU6-1192P-201ENST00000612197 107 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 RNU6-489P-201ENST00000618289 107 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 AC073136.1-201ENST00000449426 2884 ntBASIC5.69□□□□□ -1.5
CCDC38Q502W7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC38Q502W7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC38Q502W7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms