Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXF1Q12946 AC008549.2-201ENST00000333482 706 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 OR13Z1P-201ENST00000416141 834 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXF1Q12946 AL645608.4-201ENST00000423619 154 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AC012519.1-201ENST00000424588 610 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 CKS1BP6-201ENST00000424932 240 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 RPS27P18-201ENST00000431701 247 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AC008072.1-201ENST00000434254 824 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AC073648.4-201ENST00000442655 781 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXF1Q12946 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXF1Q12946 OR5D15P-201ENST00000531671 942 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXF1Q12946 AC087477.6-201ENST00000559595 843 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXF1Q12946 MIR4737-201ENST00000583979 81 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AL512782.1-201ENST00000603093 364 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 Mico1.1-201ENST00000611698 204 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AC091953.3-201ENST00000623220 236 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 AC015871.5-202ENST00000623252 701 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 MAPK10-349ENST00000641767 3661 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXF1Q12946 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXF1Q12946 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXF1Q12946 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
FOXF1Q12946 AL442639.1-201ENST00000625030 1899 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXF1Q12946 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXF1Q12946 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXF1Q12946 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXF1Q12946 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXF1Q12946 NACAP7-201ENST00000407371 609 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXF1Q12946 RN7SKP100-201ENST00000411258 284 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 RSU1P3-201ENST00000412878 835 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXF1Q12946 VN1R37P-201ENST00000419096 748 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 OR6C64P-201ENST00000419708 825 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 EIF4HP2-201ENST00000424380 563 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 OR2AH1P-201ENST00000425717 928 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXF1Q12946 AL360081.1-201ENST00000428299 555 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXF1Q12946 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXF1Q12946 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXF1Q12946 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXF1Q12946 RPS5P7-201ENST00000456664 608 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXF1Q12946 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXF1Q12946 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXF1Q12946 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXF1Q12946 OR7H2P-201ENST00000513483 306 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXF1Q12946 RNA5SP303-201ENST00000516192 130 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 RNU1-6P-201ENST00000516290 144 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
FOXF1Q12946 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXF1Q12946 RN7SL435P-201ENST00000584418 282 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXF1Q12946 AL049539.1-201ENST00000611964 459 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 AC099654.11-201ENST00000638857 294 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 SDAD1P1-202ENST00000524156 2051 ntBASIC4.32□□□□□ -1.72
FOXF1Q12946 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXF1Q12946 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXF1Q12946 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXF1Q12946 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
FOXF1Q12946 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXF1Q12946 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXF1Q12946 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXF1Q12946 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXF1Q12946 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXF1Q12946 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXF1Q12946 AC007382.1-201ENST00000624376 2618 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 CASC19-206ENST00000641028 1430 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXF1Q12946 AL136164.3-201ENST00000624429 3978 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXF1Q12946 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXF1Q12946 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
FOXF1Q12946 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXF1Q12946 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXF1Q12946 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXF1Q12946 NRBF2P3-201ENST00000432731 865 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXF1Q12946 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXF1Q12946 AC079168.2-201ENST00000453977 416 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 AC092324.1-201ENST00000468671 324 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 SCARNA22-201ENST00000503991 125 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.31□□□□□ -1.72
FOXF1Q12946 SOX5P1-201ENST00000524155 1127 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.31□□□□□ -1.72
FOXF1Q12946 FKBP1BP1-201ENST00000553366 325 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXF1Q12946 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
FOXF1Q12946 UBE2FP2-201ENST00000566646 462 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXF1Q12946 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXF1Q12946 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.31□□□□□ -1.72
FOXF1Q12946 OR7A19P-201ENST00000608051 733 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms