Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.69□□□□□ -1.82
CCL20P78556 DYNLL1P4-201ENST00000549314 266 ntBASIC3.69□□□□□ -1.82
CCL20P78556 DUX4L52-201ENST00000549363 777 ntBASIC3.69□□□□□ -1.82
CCL20P78556 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCL20P78556 AC122134.1-201ENST00000565664 1104 ntBASIC3.69□□□□□ -1.82
CCL20P78556 MRPL45P2-203ENST00000573318 473 ntBASIC3.69□□□□□ -1.82
CCL20P78556 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.69□□□□□ -1.82
CCL20P78556 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.69□□□□□ -1.82
CCL20P78556 AL158062.1-201ENST00000619632 745 ntBASIC3.69□□□□□ -1.82
CCL20P78556 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCL20P78556 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CCL20P78556 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCL20P78556 IQCB2P-201ENST00000401788 1633 ntBASIC3.69□□□□□ -1.82
CCL20P78556 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CCL20P78556 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCL20P78556 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.68□□□□□ -1.82
CCL20P78556 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.68□□□□□ -1.82
CCL20P78556 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.68□□□□□ -1.82
CCL20P78556 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 RPS17P8-201ENST00000434525 335 ntBASIC3.68□□□□□ -1.82
CCL20P78556 TIMM8BP2-201ENST00000445940 251 ntBASIC3.68□□□□□ -1.82
CCL20P78556 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.68□□□□□ -1.82
CCL20P78556 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.68□□□□□ -1.82
CCL20P78556 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CCL20P78556 AK4P6-201ENST00000505168 528 ntBASIC3.68□□□□□ -1.82
CCL20P78556 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.68□□□□□ -1.82
CCL20P78556 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 OR10G5P-201ENST00000532733 358 ntBASIC3.68□□□□□ -1.82
CCL20P78556 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.68□□□□□ -1.82
CCL20P78556 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 MIR1273E-201ENST00000581165 102 ntBASIC3.68□□□□□ -1.82
CCL20P78556 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.68□□□□□ -1.82
CCL20P78556 OR1AB1P-201ENST00000585564 761 ntBASIC3.68□□□□□ -1.82
CCL20P78556 AC069307.1-201ENST00000602820 447 ntBASIC3.68□□□□□ -1.82
CCL20P78556 AC079315.1-201ENST00000602952 623 ntBASIC3.68□□□□□ -1.82
CCL20P78556 AC010424.2-201ENST00000607594 443 ntBASIC3.68□□□□□ -1.82
CCL20P78556 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 DLD-205ENST00000440410 1993 ntTSL 2 BASIC3.68□□□□□ -1.82
CCL20P78556 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CCL20P78556 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCL20P78556 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.68□□□□□ -1.82
CCL20P78556 CR383656.5-201ENST00000547616 1340 ntBASIC3.68□□□□□ -1.82
CCL20P78556 OR13C1P-202ENST00000641378 2919 ntBASIC3.67□□□□□ -1.82
CCL20P78556 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CCL20P78556 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CCL20P78556 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCL20P78556 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 RNA5SP22-201ENST00000365393 109 ntBASIC3.67□□□□□ -1.82
CCL20P78556 RNU6-1263P-201ENST00000384601 106 ntBASIC3.67□□□□□ -1.82
CCL20P78556 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.67□□□□□ -1.82
CCL20P78556 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.67□□□□□ -1.82
CCL20P78556 CENPIP1-201ENST00000425713 902 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.67□□□□□ -1.82
CCL20P78556 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.67□□□□□ -1.82
CCL20P78556 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 AC002504.1-201ENST00000438281 691 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 NPM1P39-201ENST00000449818 867 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AL451050.1-201ENST00000450126 415 ntBASIC3.67□□□□□ -1.82
CCL20P78556 FGF7P3-201ENST00000454645 303 ntBASIC3.67□□□□□ -1.82
CCL20P78556 RPL7P45-201ENST00000455851 743 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 SEPT14P1-201ENST00000458703 648 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC079804.1-201ENST00000461922 436 ntBASIC3.67□□□□□ -1.82
CCL20P78556 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC3.67□□□□□ -1.82
CCL20P78556 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.67□□□□□ -1.82
CCL20P78556 EIF1P7-201ENST00000487533 337 ntBASIC3.67□□□□□ -1.82
CCL20P78556 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 AC025445.1-201ENST00000502728 300 ntBASIC3.67□□□□□ -1.82
CCL20P78556 PPM1AP1-201ENST00000502740 1135 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.67□□□□□ -1.82
CCL20P78556 AC006499.6-201ENST00000511169 607 ntBASIC3.67□□□□□ -1.82
CCL20P78556 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCL20P78556 HNRNPKP5-201ENST00000515300 253 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.67□□□□□ -1.82
CCL20P78556 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.67□□□□□ -1.82
CCL20P78556 IFITM8P-201ENST00000522529 394 ntBASIC3.67□□□□□ -1.82
CCL20P78556 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms