Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 AC010547.7-201ENST00000570323 333 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 AC073137.1-201ENST00000605636 634 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 AP005431.1-201ENST00000618479 319 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
EPHB3P54753 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 AL591135.1-201ENST00000401578 5914 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 AL132640.2-201ENST00000559968 1698 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AOX3P-204ENST00000491025 2107 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.29□□□□□ -1.4
EPHB3P54753 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.29□□□□□ -1.4
EPHB3P54753 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
EPHB3P54753 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.29□□□□□ -1.4
EPHB3P54753 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
EPHB3P54753 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
EPHB3P54753 MIR375-201ENST00000362103 64 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 MIR365B-201ENST00000362317 111 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 RNU6-697P-201ENST00000363348 107 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
EPHB3P54753 OR7E101P-201ENST00000400428 513 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 RN7SKP286-201ENST00000410894 299 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 PGBD4P8-201ENST00000412993 562 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 SEPT7P8-201ENST00000413308 775 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 CDK8P2-201ENST00000415020 547 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.29□□□□□ -1.4
EPHB3P54753 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.29□□□□□ -1.4
EPHB3P54753 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.29□□□□□ -1.4
EPHB3P54753 AC007563.3-201ENST00000433233 371 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 USP9YP35-201ENST00000435696 412 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC064862.4-201ENST00000442180 334 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.29□□□□□ -1.4
EPHB3P54753 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.29□□□□□ -1.4
EPHB3P54753 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.29□□□□□ -1.4
EPHB3P54753 TPMTP4-201ENST00000450749 678 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 FGF7P6-202ENST00000451282 293 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 MTND2P24-201ENST00000453434 806 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC244505.3-201ENST00000454598 187 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC112187.1-201ENST00000455837 479 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 RPSAP37-201ENST00000470913 821 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC090058.1-201ENST00000498788 435 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 HPRT1P2-201ENST00000505250 544 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 MTATP6P22-201ENST00000507369 598 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.29□□□□□ -1.4
EPHB3P54753 AC091965.2-201ENST00000512324 613 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 RNA5SP116-201ENST00000516132 98 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 SNORA70.20-201ENST00000516848 126 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.29□□□□□ -1.4
EPHB3P54753 KCTD9P6-201ENST00000522306 950 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.29□□□□□ -1.4
EPHB3P54753 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
EPHB3P54753 DEFB130C-202ENST00000530001 230 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 AC245505.1-201ENST00000556398 224 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.29□□□□□ -1.4
EPHB3P54753 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.29□□□□□ -1.4
EPHB3P54753 AC073429.2-201ENST00000569694 1444 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.29□□□□□ -1.4
EPHB3P54753 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 AC119403.2-201ENST00000590960 598 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 ZNF849P-201ENST00000594711 1566 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 AC022146.1-201ENST00000595307 847 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 AP003117.2-201ENST00000606010 545 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 MIR6768-201ENST00000610734 72 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC026368.1-201ENST00000614934 690 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 AC007742.2-201ENST00000618226 398 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms