Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CACNA2D1P54289 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CACNA2D1P54289 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CACNA2D1P54289 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.77□□□□□ -1.49
CACNA2D1P54289 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CACNA2D1P54289 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CACNA2D1P54289 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CACNA2D1P54289 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CACNA2D1P54289 AC005005.4-201ENST00000623789 16698 ntBASIC5.77□□□□□ -1.49
CACNA2D1P54289 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CACNA2D1P54289 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CACNA2D1P54289 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 OR9K1P-201ENST00000326513 941 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 RN7SKP145-201ENST00000363291 303 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 SNORD116-8-201ENST00000384365 95 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 RNA5SP339-201ENST00000390987 122 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC009518.2-201ENST00000418056 731 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 ARL2BPP3-201ENST00000421226 480 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AL136231.1-201ENST00000429407 730 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 USP9YP14-201ENST00000430663 563 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC096638.2-201ENST00000434965 711 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 MTCO1P53-201ENST00000441633 699 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC010468.1-201ENST00000461022 817 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC104849.1-201ENST00000462623 405 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC004263.1-201ENST00000479327 332 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 RN7SL214P-201ENST00000487317 265 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 GLUD1P3-202ENST00000508551 200 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC091163.3-201ENST00000518269 1144 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AP004607.2-201ENST00000533949 322 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 HMGN2P47-201ENST00000559378 272 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC009097.3-201ENST00000563557 1018 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 MTCYBP33-201ENST00000575007 1130 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 H3F3BP2-201ENST00000583907 357 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AL139344.1-201ENST00000605228 195 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC021851.1-201ENST00000608537 1082 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC007786.3-201ENST00000615154 596 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC109583.2-201ENST00000617367 129 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 MTND4P8-201ENST00000514997 1362 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CACNA2D1P54289 PABPC1P6-201ENST00000445594 1829 ntBASIC5.76□□□□□ -1.49
CACNA2D1P54289 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.76□□□□□ -1.49
CACNA2D1P54289 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CACNA2D1P54289 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 KRR1P1-201ENST00000419430 803 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 REREP1Y-201ENST00000422655 198 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 PTP4A1P7-201ENST00000423476 514 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 REREP2Y-201ENST00000439103 200 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 SNORD125-201ENST00000459538 96 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 OR9N1P-202ENST00000494289 481 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 AC008427.1-201ENST00000503102 655 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 MTND6P2-201ENST00000512226 524 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 NPM1P21-201ENST00000513394 762 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 AC010476.1-201ENST00000519111 851 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 OR11H3P-201ENST00000554547 982 ntBASIC5.75□□□□□ -1.49
CACNA2D1P54289 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.75□□□□□ -1.49
CACNA2D1P54289 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms