Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SNORA81.2-201ENST00000516868 170 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 OR5BC1P-201ENST00000529327 739 ntBASIC6.99□□□□□ -1.29
USP11P51784 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.99□□□□□ -1.29
USP11P51784 AC004217.3-201ENST00000551552 878 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 AC079171.1-201ENST00000568788 914 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.99□□□□□ -1.29
USP11P51784 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.99□□□□□ -1.29
USP11P51784 AL049840.6-201ENST00000604583 345 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC025594.3-201ENST00000613068 790 ntBASIC6.99□□□□□ -1.29
USP11P51784 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.99□□□□□ -1.29
USP11P51784 AL607023.1-201ENST00000620045 248 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC012150.2-201ENST00000621300 544 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC073592.6-201ENST00000624271 415 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 MIR4278-201ENST00000636094 69 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC099654.14-201ENST00000638599 341 ntBASIC6.99□□□□□ -1.29
USP11P51784 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.99□□□□□ -1.29
USP11P51784 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
USP11P51784 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
USP11P51784 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USP11P51784 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.98□□□□□ -1.29
USP11P51784 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USP11P51784 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.98□□□□□ -1.29
USP11P51784 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.98□□□□□ -1.29
USP11P51784 AL355377.1-201ENST00000621125 1653 ntBASIC6.98□□□□□ -1.29
USP11P51784 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.98□□□□□ -1.29
USP11P51784 ATG4AP1-201ENST00000416893 538 ntBASIC6.98□□□□□ -1.29
USP11P51784 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 RPL35AP31-201ENST00000418340 337 ntBASIC6.98□□□□□ -1.29
USP11P51784 AL109913.1-201ENST00000421173 514 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.98□□□□□ -1.29
USP11P51784 OR6K4P-201ENST00000423179 955 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 RWDD4P2-201ENST00000426392 563 ntBASIC6.98□□□□□ -1.29
USP11P51784 KCTD9P1-201ENST00000430462 1167 ntBASIC6.98□□□□□ -1.29
USP11P51784 AL590103.1-201ENST00000434488 307 ntBASIC6.98□□□□□ -1.29
USP11P51784 TRIM60P18-201ENST00000441518 828 ntBASIC6.98□□□□□ -1.29
USP11P51784 TRIM60P16-201ENST00000444048 694 ntBASIC6.98□□□□□ -1.29
USP11P51784 ST13P20-201ENST00000447996 1065 ntBASIC6.98□□□□□ -1.29
USP11P51784 MTND5P20-201ENST00000448677 143 ntBASIC6.98□□□□□ -1.29
USP11P51784 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 RPL23AP60-201ENST00000450011 454 ntBASIC6.98□□□□□ -1.29
USP11P51784 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.98□□□□□ -1.29
USP11P51784 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 AC098799.2-201ENST00000509466 868 ntBASIC6.98□□□□□ -1.29
USP11P51784 HMGB3P13-201ENST00000511263 607 ntBASIC6.98□□□□□ -1.29
USP11P51784 RN7SKP70-201ENST00000516655 271 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC011853.1-201ENST00000518911 454 ntBASIC6.98□□□□□ -1.29
USP11P51784 AP000619.3-201ENST00000535634 1127 ntBASIC6.98□□□□□ -1.29
USP11P51784 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.98□□□□□ -1.29
USP11P51784 DPPA2P4-201ENST00000563717 878 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC010547.7-201ENST00000570323 333 ntBASIC6.98□□□□□ -1.29
USP11P51784 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.98□□□□□ -1.29
USP11P51784 AC078795.3-201ENST00000602913 472 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC119501.1-201ENST00000603646 475 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC018714.1-201ENST00000605028 208 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC018690.1-201ENST00000608144 626 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC005021.1-201ENST00000608730 355 ntBASIC6.98□□□□□ -1.29
USP11P51784 AC092681.3-201ENST00000609463 678 ntBASIC6.98□□□□□ -1.29
USP11P51784 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USP11P51784 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.98□□□□□ -1.29
USP11P51784 AP004289.1-201ENST00000436307 2205 ntBASIC6.98□□□□□ -1.29
USP11P51784 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.98□□□□□ -1.29
USP11P51784 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.98□□□□□ -1.29
USP11P51784 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USP11P51784 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USP11P51784 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 SHQ1P1-201ENST00000437111 1544 ntBASIC6.97□□□□□ -1.29
USP11P51784 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 AL121657.1-201ENST00000327215 531 ntBASIC6.97□□□□□ -1.29
USP11P51784 RNU1-134P-201ENST00000362935 165 ntBASIC6.97□□□□□ -1.29
USP11P51784 snoZ40.1-201ENST00000364540 72 ntBASIC6.97□□□□□ -1.29
USP11P51784 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 SNORA51.9-201ENST00000384295 124 ntBASIC6.97□□□□□ -1.29
USP11P51784 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
USP11P51784 TPMTP3-201ENST00000411928 735 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC116036.1-201ENST00000412199 367 ntBASIC6.97□□□□□ -1.29
USP11P51784 CEACAMP8-201ENST00000413902 580 ntBASIC6.97□□□□□ -1.29
USP11P51784 VTA1P1-201ENST00000414044 866 ntBASIC6.97□□□□□ -1.29
USP11P51784 MTND4LP17-201ENST00000414607 293 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms