Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CPT1AP50416 AC008432.1-201ENST00000615912 1320 ntBASIC5.93□□□□□ -1.46
CPT1AP50416 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.93□□□□□ -1.46
CPT1AP50416 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CPT1AP50416 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 MTND5P11-201ENST00000511037 1812 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.92□□□□□ -1.46
CPT1AP50416 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.92□□□□□ -1.46
CPT1AP50416 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.92□□□□□ -1.46
CPT1AP50416 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.92□□□□□ -1.46
CPT1AP50416 INTS6P1-201ENST00000504674 2530 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 RNA5SP123-201ENST00000363244 119 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 RNU1-146P-201ENST00000364015 165 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 AL672167.2-201ENST00000377164 879 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CPT1AP50416 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 RNU6-468P-201ENST00000384003 109 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 RNU6-481P-201ENST00000384194 107 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CPT1AP50416 HMGB3P19-201ENST00000403971 560 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 TCEA1P2-201ENST00000420496 906 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 DDX39BP1-205ENST00000422507 192 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 AC021876.1-201ENST00000425959 359 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 AC009784.1-201ENST00000426484 460 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.92□□□□□ -1.46
CPT1AP50416 FO393414.1-201ENST00000428697 1184 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.92□□□□□ -1.46
CPT1AP50416 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.92□□□□□ -1.46
CPT1AP50416 MTCO1P43-201ENST00000431831 488 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 RRM2P4-201ENST00000441721 562 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 LINC02210-201ENST00000444561 288 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 RPL6P5-201ENST00000445678 828 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 AC079168.1-201ENST00000458741 345 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 RPS17P11-201ENST00000474297 293 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 AC058823.1-201ENST00000485315 474 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.92□□□□□ -1.46
CPT1AP50416 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.92□□□□□ -1.46
CPT1AP50416 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.92□□□□□ -1.46
CPT1AP50416 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.92□□□□□ -1.46
CPT1AP50416 AC021451.1-201ENST00000523498 1129 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.92□□□□□ -1.46
CPT1AP50416 CR383656.6-201ENST00000550518 394 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.92□□□□□ -1.46
CPT1AP50416 AC016839.1-201ENST00000578162 867 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.92□□□□□ -1.46
CPT1AP50416 AL512427.1-201ENST00000618593 349 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.92□□□□□ -1.46
CPT1AP50416 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 AC114774.1-201ENST00000507410 1770 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CPT1AP50416 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.92□□□□□ -1.46
CPT1AP50416 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
CPT1AP50416 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.92□□□□□ -1.46
CPT1AP50416 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CPT1AP50416 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.92□□□□□ -1.46
CPT1AP50416 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.92□□□□□ -1.46
CPT1AP50416 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.91□□□□□ -1.46
CPT1AP50416 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.91□□□□□ -1.46
CPT1AP50416 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.91□□□□□ -1.46
CPT1AP50416 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CPT1AP50416 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CPT1AP50416 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 RN7SKP104-201ENST00000362605 328 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 SNORA51.8-201ENST00000384234 132 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CPT1AP50416 RNA5SP105-201ENST00000391123 113 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AL078599.1-201ENST00000402075 293 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 RNU2-17P-201ENST00000410290 190 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AC096533.1-201ENST00000411645 353 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AL158825.1-201ENST00000414735 521 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AC006065.1-201ENST00000422539 802 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AC241520.1-201ENST00000422654 1099 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.91□□□□□ -1.46
CPT1AP50416 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.91□□□□□ -1.46
CPT1AP50416 NIPA2P1-201ENST00000426223 976 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AC104837.2-201ENST00000427236 424 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AL049745.1-201ENST00000433953 286 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.91□□□□□ -1.46
CPT1AP50416 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.91□□□□□ -1.46
CPT1AP50416 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.91□□□□□ -1.46
CPT1AP50416 RPS29P22-201ENST00000472363 168 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CPT1AP50416 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.91□□□□□ -1.46
CPT1AP50416 AC021106.1-201ENST00000509020 1058 ntBASIC5.91□□□□□ -1.46
CPT1AP50416 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms