Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC005084.1-201ENST00000605160 304 ntBASIC5.03□□□□□ -1.6
TRIM23P36406 BNIP3P7-201ENST00000605641 516 ntBASIC5.03□□□□□ -1.6
TRIM23P36406 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM23P36406 AL049539.1-201ENST00000611964 459 ntBASIC5.03□□□□□ -1.6
TRIM23P36406 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM23P36406 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM23P36406 RNU6-368P-201ENST00000620928 107 ntBASIC5.03□□□□□ -1.6
TRIM23P36406 RNU6-538P-201ENST00000622329 107 ntBASIC5.03□□□□□ -1.6
TRIM23P36406 AL353662.3-201ENST00000625131 237 ntBASIC5.03□□□□□ -1.6
TRIM23P36406 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM23P36406 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM23P36406 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRIM23P36406 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM23P36406 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM23P36406 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM23P36406 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM23P36406 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM23P36406 AC053481.2-202ENST00000582394 1500 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC107021.2-201ENST00000567714 2095 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 RN7SKP95-201ENST00000362860 303 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM23P36406 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 SNORA2.3-201ENST00000383920 135 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 RNU6-729P-201ENST00000384399 107 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 SNORA66-201ENST00000384792 133 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AL390316.1-201ENST00000406279 553 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 BX323845.1-201ENST00000432417 179 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 PA2G4P6-201ENST00000438325 1197 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 RPL31P44-201ENST00000447680 377 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 NPM1P39-201ENST00000449818 867 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM23P36406 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AC117525.1-201ENST00000515228 503 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM23P36406 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC119501.1-201ENST00000603646 475 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AC108359.1-201ENST00000616451 1211 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AL445528.2-201ENST00000620582 470 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM23P36406 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM23P36406 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC073429.2-201ENST00000569694 1444 ntBASIC5.02□□□□□ -1.61
TRIM23P36406 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM23P36406 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM23P36406 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM23P36406 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM23P36406 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRIM23P36406 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 MIR365B-201ENST00000362317 111 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 AP002530.1-201ENST00000405705 684 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 CTSL3P-202ENST00000412179 788 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM23P36406 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM23P36406 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM23P36406 COX6CP13-201ENST00000428703 226 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 AL392003.1-201ENST00000434394 243 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 AC012512.1-201ENST00000446594 718 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 C1DP3-201ENST00000455013 423 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM23P36406 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.01□□□□□ -1.61
TRIM23P36406 RN7SL441P-201ENST00000492388 296 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 AC140172.1-201ENST00000502928 141 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM23P36406 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 AC005000.1-201ENST00000536192 288 ntBASIC5.01□□□□□ -1.61
TRIM23P36406 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM23P36406 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms