Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCLP35914 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HMGCLP35914 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCLP35914 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCLP35914 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HMGCLP35914 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
HMGCLP35914 UBBP2-201ENST00000376781 231 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HMGCLP35914 HMGB3P7-201ENST00000400214 611 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 AL109941.1-201ENST00000401925 229 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 RNA5SP345-201ENST00000410646 108 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 GTF2IP5-201ENST00000414608 731 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCLP35914 BTF3P6-201ENST00000448054 499 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGCLP35914 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 FCF1P7-201ENST00000451185 558 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 AC116562.1-201ENST00000485355 781 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGCLP35914 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGCLP35914 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGCLP35914 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGCLP35914 ENPP7P9-201ENST00000514456 627 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 SNORD116-30-201ENST00000516468 85 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 AP000676.2-201ENST00000529711 301 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGCLP35914 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGCLP35914 MIR4646-201ENST00000580775 63 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGCLP35914 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGCLP35914 AC138473.1-201ENST00000605717 526 ntBASIC4.91□□□□□ -1.62
HMGCLP35914 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
HMGCLP35914 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGCLP35914 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGCLP35914 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCLP35914 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCLP35914 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCLP35914 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HMGCLP35914 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGCLP35914 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
HMGCLP35914 AC008758.3-201ENST00000507003 1829 ntBASIC4.9□□□□□ -1.62
HMGCLP35914 RBPJP2-201ENST00000618187 1444 ntBASIC4.9□□□□□ -1.62
HMGCLP35914 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
HMGCLP35914 AC245100.2-201ENST00000454544 1679 ntBASIC4.9□□□□□ -1.62
HMGCLP35914 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HMGCLP35914 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGCLP35914 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGCLP35914 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCLP35914 AC007068.1-201ENST00000396690 844 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCLP35914 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCLP35914 RN7SKP247-201ENST00000411094 308 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.9□□□□□ -1.63
HMGCLP35914 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCLP35914 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.9□□□□□ -1.63
HMGCLP35914 AC092162.1-201ENST00000432828 434 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AC093414.1-201ENST00000434712 514 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AC092447.2-201ENST00000435487 669 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGCLP35914 AC000111.2-201ENST00000448200 210 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGCLP35914 RPL23AP56-201ENST00000460778 453 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 GYG1P1-201ENST00000460864 698 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGCLP35914 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCLP35914 AL133372.1-201ENST00000493565 745 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 GAPDHP56-201ENST00000506031 988 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 RNA5SP392-201ENST00000516905 112 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AL049830.4-201ENST00000555149 351 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AP002884.5-201ENST00000595053 1132 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AL137072.1-201ENST00000603444 466 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 BNIP3P7-201ENST00000605641 516 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AC010424.2-201ENST00000607594 443 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AC133644.2-201ENST00000608142 540 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 AC020658.4-201ENST00000613987 684 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCLP35914 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCLP35914 CASC19-222ENST00000641321 1173 ntBASIC4.9□□□□□ -1.63
HMGCLP35914 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
HMGCLP35914 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCLP35914 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCLP35914 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGCLP35914 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCLP35914 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
HMGCLP35914 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCLP35914 AL731566.1-201ENST00000620490 1937 ntBASIC4.89□□□□□ -1.63
HMGCLP35914 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCLP35914 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
HMGCLP35914 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGCLP35914 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCLP35914 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMGCLP35914 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
HMGCLP35914 AL357515.1-201ENST00000402967 542 ntBASIC4.89□□□□□ -1.63
HMGCLP35914 TBCAP2-201ENST00000416175 326 ntBASIC4.89□□□□□ -1.63
HMGCLP35914 RPL12P43-201ENST00000420608 499 ntBASIC4.89□□□□□ -1.63
HMGCLP35914 VN1R54P-201ENST00000435210 1049 ntBASIC4.89□□□□□ -1.63
HMGCLP35914 AL450263.2-201ENST00000439400 589 ntBASIC4.89□□□□□ -1.63
HMGCLP35914 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCLP35914 AC112498.1-201ENST00000444401 332 ntBASIC4.89□□□□□ -1.63
HMGCLP35914 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms