Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC4P35249 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RFC4P35249 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC4P35249 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC4P35249 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC4P35249 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC4P35249 AL442639.1-201ENST00000625030 1899 ntBASIC6.11□□□□□ -1.43
RFC4P35249 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC4P35249 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC4P35249 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC4P35249 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC4P35249 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 AL050305.1-201ENST00000399993 1230 ntBASIC6.1□□□□□ -1.43
RFC4P35249 RN7SKP263-201ENST00000411194 309 ntBASIC6.1□□□□□ -1.43
RFC4P35249 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC4P35249 AC091868.1-201ENST00000508746 304 ntBASIC6.1□□□□□ -1.43
RFC4P35249 AC106806.2-201ENST00000509365 500 ntBASIC6.1□□□□□ -1.43
RFC4P35249 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.1□□□□□ -1.43
RFC4P35249 AC084824.1-201ENST00000550917 1005 ntBASIC6.1□□□□□ -1.43
RFC4P35249 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC4P35249 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC4P35249 AC084783.1-201ENST00000565846 910 ntBASIC6.1□□□□□ -1.43
RFC4P35249 RN7SL802P-201ENST00000577858 299 ntBASIC6.1□□□□□ -1.43
RFC4P35249 AL121890.3-201ENST00000618494 516 ntBASIC6.1□□□□□ -1.43
RFC4P35249 AL035461.2-201ENST00000619201 524 ntBASIC6.1□□□□□ -1.43
RFC4P35249 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC4P35249 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC4P35249 AC008758.3-201ENST00000507003 1829 ntBASIC6.1□□□□□ -1.43
RFC4P35249 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC4P35249 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC4P35249 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RFC4P35249 AC007382.1-201ENST00000624376 2618 ntBASIC6.1□□□□□ -1.43
RFC4P35249 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC4P35249 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC4P35249 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC4P35249 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC4P35249 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC4P35249 RNA5SP509-201ENST00000364577 119 ntBASIC6.09□□□□□ -1.43
RFC4P35249 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFC4P35249 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFC4P35249 CBX1P3-201ENST00000413296 527 ntBASIC6.09□□□□□ -1.43
RFC4P35249 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.09□□□□□ -1.43
RFC4P35249 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.09□□□□□ -1.43
RFC4P35249 AC122718.1-201ENST00000439448 744 ntBASIC6.09□□□□□ -1.43
RFC4P35249 CBX1P1-201ENST00000440184 427 ntBASIC6.09□□□□□ -1.43
RFC4P35249 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.09□□□□□ -1.43
RFC4P35249 CDC27P1-201ENST00000445384 715 ntBASIC6.09□□□□□ -1.43
RFC4P35249 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.09□□□□□ -1.43
RFC4P35249 FAM133DP-201ENST00000464802 691 ntBASIC6.09□□□□□ -1.43
RFC4P35249 OR2A3P-201ENST00000493774 953 ntBASIC6.09□□□□□ -1.43
RFC4P35249 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.09□□□□□ -1.43
RFC4P35249 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFC4P35249 SNORA70.11-201ENST00000515987 138 ntBASIC6.09□□□□□ -1.43
RFC4P35249 SNORA70.13-201ENST00000516116 138 ntBASIC6.09□□□□□ -1.43
RFC4P35249 RNU1-6P-201ENST00000516290 144 ntBASIC6.09□□□□□ -1.43
RFC4P35249 AC092709.1-201ENST00000521355 1045 ntBASIC6.09□□□□□ -1.43
RFC4P35249 AC007224.1-201ENST00000564410 144 ntBASIC6.09□□□□□ -1.43
RFC4P35249 MIR5699-201ENST00000578903 90 ntBASIC6.09□□□□□ -1.43
RFC4P35249 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.09□□□□□ -1.43
RFC4P35249 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.09□□□□□ -1.43
RFC4P35249 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC4P35249 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
RFC4P35249 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC4P35249 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
RFC4P35249 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RFC4P35249 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
RFC4P35249 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RFC4P35249 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RFC4P35249 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
RFC4P35249 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RFC4P35249 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC4P35249 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RFC4P35249 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.08□□□□□ -1.44
RFC4P35249 PROS2P-201ENST00000474651 1951 ntBASIC6.08□□□□□ -1.44
RFC4P35249 AC002525.1-201ENST00000624392 1622 ntBASIC6.08□□□□□ -1.44
RFC4P35249 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 SNORA73.1-201ENST00000363107 205 ntBASIC6.08□□□□□ -1.44
RFC4P35249 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.08□□□□□ -1.44
RFC4P35249 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.08□□□□□ -1.44
RFC4P35249 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFC4P35249 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.08□□□□□ -1.44
RFC4P35249 AC023271.1-201ENST00000445936 1090 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms