Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF4P23510 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 SNORA21-201ENST00000362423 132 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 RNU6-560P-201ENST00000364007 108 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 SNORD116.1-201ENST00000365628 92 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 MIR217-201ENST00000384817 110 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 SNORD65.1-201ENST00000390889 71 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AF228730.1-201ENST00000397972 663 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC116036.1-201ENST00000412199 367 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AP000534.2-201ENST00000412729 568 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AL035422.1-201ENST00000414193 397 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AC019050.1-201ENST00000418508 492 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC005005.2-201ENST00000420779 380 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF4P23510 GTF2IP23-201ENST00000423746 351 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AKR1B10P1-201ENST00000425765 942 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AL158073.1-201ENST00000426848 1104 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 HIGD1AP4-201ENST00000430194 280 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 RPL12P46-201ENST00000436610 195 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF4P23510 TRIM60P16-201ENST00000444048 694 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 USP9YP25-201ENST00000457708 443 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 MTCO2P6-201ENST00000463134 685 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AC010683.1-201ENST00000473673 378 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC092865.4-201ENST00000477936 615 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 RPL30P11-201ENST00000495304 339 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC105233.1-201ENST00000498840 781 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 CCDC11P1-201ENST00000503137 1162 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AC109471.1-201ENST00000511631 612 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AP003396.4-201ENST00000527574 265 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AC107958.1-201ENST00000556576 290 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF4P23510 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AC092332.1-201ENST00000563684 829 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 MIR3189-201ENST00000578735 73 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 NIFKP6-201ENST00000598115 845 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC008536.1-201ENST00000602872 669 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 MRPS35P3-201ENST00000603189 709 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 ELOCP35-201ENST00000604289 336 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 Z99289.3-201ENST00000605586 594 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AC022106.1-201ENST00000612834 766 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF4P23510 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF4P23510 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 ECM1P2-201ENST00000503354 1577 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AL450326.2-201ENST00000421913 1962 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 XPOTP1-201ENST00000443317 2398 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF4P23510 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TNFSF4P23510 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF4P23510 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TNFSF4P23510 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 WDR95P-201ENST00000425638 1542 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 EIF3EP1-201ENST00000433978 1316 ntBASIC5.23□□□□□ -1.57
TNFSF4P23510 AC239868.2-201ENST00000564237 4527 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TNFSF4P23510 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.22□□□□□ -1.57
TNFSF4P23510 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF4P23510 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF4P23510 AC104966.1-201ENST00000467010 1464 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF4P23510 HDAC1P2-201ENST00000453661 1398 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF4P23510 LCN1P2-201ENST00000372030 223 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
TNFSF4P23510 Y_RNA.465-201ENST00000384293 102 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 MIR621-201ENST00000384919 96 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF4P23510 AL139098.1-201ENST00000407291 389 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.22□□□□□ -1.57
TNFSF4P23510 AC010099.3-201ENST00000423896 409 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 RPL21P43-201ENST00000425440 472 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 Z93242.1-201ENST00000427102 353 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 RPSAP65-201ENST00000429660 595 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.22□□□□□ -1.57
TNFSF4P23510 USP9YP31-201ENST00000431405 881 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 CETN4P-201ENST00000432407 469 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 SEPT7P5-201ENST00000434048 306 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.22□□□□□ -1.57
TNFSF4P23510 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.22□□□□□ -1.57
TNFSF4P23510 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.22□□□□□ -1.57
TNFSF4P23510 AL596266.1-201ENST00000448132 400 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 RPL23AP60-201ENST00000450011 454 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 PPIAP7-201ENST00000454070 489 ntBASIC5.22□□□□□ -1.57
TNFSF4P23510 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms