Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LIG1P18858 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.09□□□□□ -1.27
LIG1P18858 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LIG1P18858 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.09□□□□□ -1.27
LIG1P18858 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LIG1P18858 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.09□□□□□ -1.27
LIG1P18858 OR56B2P-201ENST00000317102 954 ntBASIC7.09□□□□□ -1.27
LIG1P18858 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.09□□□□□ -1.27
LIG1P18858 U3.4-201ENST00000363352 213 ntBASIC7.09□□□□□ -1.27
LIG1P18858 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.09□□□□□ -1.27
LIG1P18858 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.09□□□□□ -1.27
LIG1P18858 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.09□□□□□ -1.27
LIG1P18858 RNU6-1200P-201ENST00000384162 107 ntBASIC7.09□□□□□ -1.27
LIG1P18858 RNU6-549P-201ENST00000384433 107 ntBASIC7.09□□□□□ -1.27
LIG1P18858 RPS7P14-201ENST00000426405 583 ntBASIC7.09□□□□□ -1.27
LIG1P18858 MGAT2P2-201ENST00000427194 797 ntBASIC7.09□□□□□ -1.27
LIG1P18858 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.09□□□□□ -1.27
LIG1P18858 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.09□□□□□ -1.27
LIG1P18858 AC019084.1-201ENST00000457337 432 ntBASIC7.09□□□□□ -1.27
LIG1P18858 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.09□□□□□ -1.27
LIG1P18858 CCDC75P1-201ENST00000469247 791 ntBASIC7.09□□□□□ -1.27
LIG1P18858 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 H3F3AP5-201ENST00000475267 429 ntBASIC7.09□□□□□ -1.27
LIG1P18858 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.09□□□□□ -1.27
LIG1P18858 AC004069.2-201ENST00000505438 1114 ntBASIC7.09□□□□□ -1.27
LIG1P18858 HMGN1P16-201ENST00000508308 283 ntBASIC7.09□□□□□ -1.27
LIG1P18858 RPA2P3-201ENST00000533268 770 ntBASIC7.09□□□□□ -1.27
LIG1P18858 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.09□□□□□ -1.27
LIG1P18858 EEF1B2P4-201ENST00000551398 348 ntBASIC7.09□□□□□ -1.27
LIG1P18858 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.09□□□□□ -1.27
LIG1P18858 AC006530.1-201ENST00000555980 571 ntBASIC7.09□□□□□ -1.27
LIG1P18858 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 AC090826.1-203ENST00000569235 490 ntBASIC7.09□□□□□ -1.27
LIG1P18858 RNU4ATAC-201ENST00000580972 127 ntBASIC7.09□□□□□ -1.27
LIG1P18858 AC012417.1-201ENST00000582307 1039 ntBASIC7.09□□□□□ -1.27
LIG1P18858 AC020916.2-201ENST00000591242 360 ntBASIC7.09□□□□□ -1.27
LIG1P18858 AC128687.1-201ENST00000605304 619 ntBASIC7.09□□□□□ -1.27
LIG1P18858 AC004890.3-201ENST00000605566 1095 ntBASIC7.09□□□□□ -1.27
LIG1P18858 AC126118.1-201ENST00000607744 628 ntBASIC7.09□□□□□ -1.27
LIG1P18858 AC025253.1-201ENST00000613623 543 ntBASIC7.09□□□□□ -1.27
LIG1P18858 MIR7159-201ENST00000620587 66 ntBASIC7.09□□□□□ -1.27
LIG1P18858 AC008443.7-201ENST00000622195 246 ntBASIC7.09□□□□□ -1.27
LIG1P18858 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 MIR4278-201ENST00000636094 69 ntBASIC7.09□□□□□ -1.27
LIG1P18858 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LIG1P18858 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.09□□□□□ -1.27
LIG1P18858 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LIG1P18858 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.09□□□□□ -1.27
LIG1P18858 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 AP000776.1-201ENST00000530032 1663 ntBASIC7.09□□□□□ -1.27
LIG1P18858 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
LIG1P18858 AL136984.1-201ENST00000607611 1893 ntBASIC7.09□□□□□ -1.28
LIG1P18858 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
LIG1P18858 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.09□□□□□ -1.28
LIG1P18858 AC007342.7-201ENST00000624610 2337 ntBASIC7.09□□□□□ -1.28
LIG1P18858 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
LIG1P18858 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LIG1P18858 SAMM50P1-201ENST00000455403 1399 ntBASIC7.08□□□□□ -1.28
LIG1P18858 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LIG1P18858 RNA5SP279-201ENST00000365513 117 ntBASIC7.08□□□□□ -1.28
LIG1P18858 RPS3AP24-201ENST00000407896 734 ntBASIC7.08□□□□□ -1.28
LIG1P18858 RN7SKP142-201ENST00000411236 328 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC007899.1-201ENST00000412776 775 ntBASIC7.08□□□□□ -1.28
LIG1P18858 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LIG1P18858 IPPKP1-201ENST00000422501 768 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 USP9YP35-201ENST00000435696 412 ntBASIC7.08□□□□□ -1.28
LIG1P18858 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AL121601.2-201ENST00000438019 707 ntBASIC7.08□□□□□ -1.28
LIG1P18858 EMC3-AS1-205ENST00000438698 534 ntBASIC7.08□□□□□ -1.28
LIG1P18858 MTND3P1-201ENST00000441336 220 ntBASIC7.08□□□□□ -1.28
LIG1P18858 COX6CP2-201ENST00000444980 225 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AC027673.1-201ENST00000456245 405 ntBASIC7.08□□□□□ -1.28
LIG1P18858 CFTRP1-201ENST00000456646 183 ntBASIC7.08□□□□□ -1.28
LIG1P18858 RANP2-201ENST00000456833 229 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC104339.1-201ENST00000465478 348 ntBASIC7.08□□□□□ -1.28
LIG1P18858 RPL7P1-201ENST00000468161 747 ntBASIC7.08□□□□□ -1.28
LIG1P18858 RPL7P9-201ENST00000468715 747 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC126182.1-201ENST00000478134 357 ntBASIC7.08□□□□□ -1.28
LIG1P18858 RN7SL714P-201ENST00000487050 298 ntBASIC7.08□□□□□ -1.28
LIG1P18858 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.08□□□□□ -1.28
LIG1P18858 AC113367.2-201ENST00000505749 160 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.08□□□□□ -1.28
LIG1P18858 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 RNA5SP441-201ENST00000516809 88 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.08□□□□□ -1.28
LIG1P18858 AC016957.1-201ENST00000534895 309 ntBASIC7.08□□□□□ -1.28
LIG1P18858 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LIG1P18858 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AC087883.1-201ENST00000551882 391 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms