Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNA5SP279-201ENST00000365513 117 ntBASIC5.92□□□□□ -1.46
ATF4P18848 RNU6-1226P-201ENST00000384317 107 ntBASIC5.92□□□□□ -1.46
ATF4P18848 RPL24P7-201ENST00000399435 453 ntBASIC5.92□□□□□ -1.46
ATF4P18848 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.92□□□□□ -1.46
ATF4P18848 CTSLP8-201ENST00000413075 967 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.92□□□□□ -1.46
ATF4P18848 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 NUP35P2-201ENST00000416748 943 ntBASIC5.92□□□□□ -1.46
ATF4P18848 YBX1P8-201ENST00000421881 943 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AL513174.1-201ENST00000423182 629 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.92□□□□□ -1.46
ATF4P18848 NPM1P34-201ENST00000428821 893 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.92□□□□□ -1.46
ATF4P18848 RPL5P4-201ENST00000434805 886 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AL451136.1-201ENST00000435399 325 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC104698.1-201ENST00000435671 276 ntBASIC5.92□□□□□ -1.46
ATF4P18848 OSTCP2-201ENST00000437956 444 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 HSPE1P28-201ENST00000443139 211 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 EIF4A1P11-201ENST00000451239 222 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AL590326.1-201ENST00000460857 334 ntBASIC5.92□□□□□ -1.46
ATF4P18848 RPL31P50-201ENST00000471002 296 ntBASIC5.92□□□□□ -1.46
ATF4P18848 RN7SL165P-201ENST00000477476 291 ntBASIC5.92□□□□□ -1.46
ATF4P18848 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 AC105391.1-201ENST00000503155 1045 ntBASIC5.92□□□□□ -1.46
ATF4P18848 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 KCTD9P2-201ENST00000512203 1013 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC034159.1-201ENST00000513885 583 ntBASIC5.92□□□□□ -1.46
ATF4P18848 RNU6-1178P-201ENST00000516674 107 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC5.92□□□□□ -1.46
ATF4P18848 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.92□□□□□ -1.46
ATF4P18848 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.92□□□□□ -1.46
ATF4P18848 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.92□□□□□ -1.46
ATF4P18848 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATF4P18848 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.92□□□□□ -1.46
ATF4P18848 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.92□□□□□ -1.46
ATF4P18848 DNM1P33-201ENST00000565222 270 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.92□□□□□ -1.46
ATF4P18848 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.92□□□□□ -1.46
ATF4P18848 MIR3714-201ENST00000579507 65 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.92□□□□□ -1.46
ATF4P18848 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AL022154.1-201ENST00000604698 785 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC090948.2-201ENST00000607363 564 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC091834.1-201ENST00000614543 472 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC016999.2-201ENST00000614692 556 ntBASIC5.92□□□□□ -1.46
ATF4P18848 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.92□□□□□ -1.46
ATF4P18848 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.92□□□□□ -1.46
ATF4P18848 CYP3A51P-201ENST00000633513 256 ntBASIC5.92□□□□□ -1.46
ATF4P18848 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ATF4P18848 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC5.92□□□□□ -1.46
ATF4P18848 AC005332.5-201ENST00000591222 2919 ntBASIC5.92□□□□□ -1.46
ATF4P18848 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATF4P18848 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
ATF4P18848 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATF4P18848 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ATF4P18848 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.92□□□□□ -1.46
ATF4P18848 ELL2P4-201ENST00000446870 1376 ntBASIC5.92□□□□□ -1.46
ATF4P18848 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATF4P18848 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.92□□□□□ -1.46
ATF4P18848 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATF4P18848 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.91□□□□□ -1.46
ATF4P18848 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
ATF4P18848 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.91□□□□□ -1.46
ATF4P18848 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATF4P18848 AC011504.1-201ENST00000623331 4103 ntBASIC5.91□□□□□ -1.46
ATF4P18848 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATF4P18848 AP005435.3-201ENST00000531260 3198 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AC005725.1-201ENST00000577346 2607 ntBASIC5.91□□□□□ -1.46
ATF4P18848 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ATF4P18848 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATF4P18848 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ATF4P18848 RNU6-1243P-201ENST00000364028 107 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.91□□□□□ -1.46
ATF4P18848 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
ATF4P18848 RNU11-201ENST00000387069 134 ntBASIC5.91□□□□□ -1.46
ATF4P18848 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC5.91□□□□□ -1.46
ATF4P18848 RN7SKP207-201ENST00000411204 303 ntBASIC5.91□□□□□ -1.46
ATF4P18848 MTCO1P17-201ENST00000411522 491 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AC009413.1-201ENST00000414823 399 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATF4P18848 MTCO2P5-201ENST00000422621 426 ntBASIC5.91□□□□□ -1.46
ATF4P18848 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATF4P18848 NANOGP6-201ENST00000429190 847 ntBASIC5.91□□□□□ -1.46
ATF4P18848 RPSAP62-201ENST00000432596 833 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC5.91□□□□□ -1.46
ATF4P18848 RPS3AP54-201ENST00000435535 734 ntBASIC5.91□□□□□ -1.46
ATF4P18848 OR3B1P-201ENST00000437536 893 ntBASIC5.91□□□□□ -1.46
ATF4P18848 CYCSP12-201ENST00000437729 300 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC5.91□□□□□ -1.46
ATF4P18848 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.91□□□□□ -1.46
ATF4P18848 AC090142.1-201ENST00000465776 462 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AP005202.1-201ENST00000489915 867 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AC112204.1-201ENST00000502591 103 ntBASIC5.91□□□□□ -1.46
ATF4P18848 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.91□□□□□ -1.46
ATF4P18848 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms