Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.34□□□□□ -1.55
PDGFRAP16234 RPL7AP6-201ENST00000477943 801 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 AC005412.2-201ENST00000492004 341 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFRAP16234 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.34□□□□□ -1.55
PDGFRAP16234 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFRAP16234 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFRAP16234 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFRAP16234 AP002373.2-201ENST00000541631 1060 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.34□□□□□ -1.55
PDGFRAP16234 DPRXP4-201ENST00000578053 568 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFRAP16234 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFRAP16234 AC087763.1-201ENST00000603391 286 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 AC015802.5-201ENST00000607478 399 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFRAP16234 MIR7155-201ENST00000615925 56 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 LINC00216-201ENST00000623548 1126 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.34□□□□□ -1.55
PDGFRAP16234 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFRAP16234 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PDGFRAP16234 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFRAP16234 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
PDGFRAP16234 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFRAP16234 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.34□□□□□ -1.56
PDGFRAP16234 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFRAP16234 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFRAP16234 AC110792.3-201ENST00000595906 1614 ntBASIC5.34□□□□□ -1.56
PDGFRAP16234 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFRAP16234 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFRAP16234 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFRAP16234 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFRAP16234 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
PDGFRAP16234 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFRAP16234 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 U3.32-201ENST00000408116 212 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 RN7SKP16-201ENST00000410180 299 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFRAP16234 AC007394.1-201ENST00000421941 531 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 FAM204CP-201ENST00000424489 642 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFRAP16234 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFRAP16234 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFRAP16234 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFRAP16234 CYCSP24-201ENST00000445119 316 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFRAP16234 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFRAP16234 AL513343.1-201ENST00000451818 792 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFRAP16234 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AC025181.1-201ENST00000477507 416 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AC090114.3-201ENST00000479267 829 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 OR52A4P-202ENST00000481634 799 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AC093270.2-201ENST00000486157 792 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFRAP16234 ACTR6P1-201ENST00000514311 1104 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFRAP16234 RN7SKP66-201ENST00000516681 231 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFRAP16234 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFRAP16234 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFRAP16234 NDUFB4P11-201ENST00000560510 395 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.33□□□□□ -1.56
PDGFRAP16234 MIR4660-201ENST00000583549 74 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFRAP16234 AC096553.1-201ENST00000605169 829 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFRAP16234 AC037198.3-201ENST00000616754 526 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
PDGFRAP16234 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFRAP16234 LINC01739-205ENST00000641890 573 ntBASIC5.33□□□□□ -1.56
PDGFRAP16234 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFRAP16234 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFRAP16234 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFRAP16234 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
PDGFRAP16234 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
PDGFRAP16234 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFRAP16234 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 AL645927.1-201ENST00000396783 406 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PDGFRAP16234 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
PDGFRAP16234 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.32□□□□□ -1.56
PDGFRAP16234 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.32□□□□□ -1.56
PDGFRAP16234 BTF3P9-201ENST00000418784 283 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 OR6C64P-201ENST00000419708 825 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.32□□□□□ -1.56
PDGFRAP16234 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.32□□□□□ -1.56
PDGFRAP16234 AL606490.7-201ENST00000433136 191 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFRAP16234 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.32□□□□□ -1.56
PDGFRAP16234 TPRKBP1-201ENST00000456243 481 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 AC004453.1-201ENST00000487895 408 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 AC109462.1-201ENST00000491087 368 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 AC092490.3-201ENST00000545370 572 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms