Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.24□□□□□ -1.57
PCNAP12004 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.24□□□□□ -1.57
PCNAP12004 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 CD24P2-201ENST00000565486 219 ntBASIC5.24□□□□□ -1.57
PCNAP12004 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.24□□□□□ -1.57
PCNAP12004 SNORD39.2-201ENST00000579995 76 ntBASIC5.24□□□□□ -1.57
PCNAP12004 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.24□□□□□ -1.57
PCNAP12004 AC096947.1-201ENST00000603233 470 ntBASIC5.24□□□□□ -1.57
PCNAP12004 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.24□□□□□ -1.57
PCNAP12004 AC012557.1-201ENST00000607115 611 ntBASIC5.24□□□□□ -1.57
PCNAP12004 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCNAP12004 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 AC023510.2-201ENST00000622162 746 ntBASIC5.24□□□□□ -1.57
PCNAP12004 CU639417.4-201ENST00000623928 207 ntBASIC5.24□□□□□ -1.57
PCNAP12004 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.24□□□□□ -1.57
PCNAP12004 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCNAP12004 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.24□□□□□ -1.57
PCNAP12004 DDX18P3-201ENST00000404856 2007 ntBASIC5.24□□□□□ -1.57
PCNAP12004 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 AC100757.1-201ENST00000616872 1835 ntBASIC5.23□□□□□ -1.57
PCNAP12004 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.23□□□□□ -1.57
PCNAP12004 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.23□□□□□ -1.57
PCNAP12004 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.23□□□□□ -1.57
PCNAP12004 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCNAP12004 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 SNORA16A-201ENST00000384342 137 ntBASIC5.23□□□□□ -1.57
PCNAP12004 AC010385.1-201ENST00000412374 256 ntBASIC5.23□□□□□ -1.57
PCNAP12004 XKRYP4-201ENST00000414395 483 ntBASIC5.23□□□□□ -1.57
PCNAP12004 SDHDP6-201ENST00000414693 480 ntBASIC5.23□□□□□ -1.57
PCNAP12004 BMS1P17-202ENST00000416720 316 ntBASIC5.23□□□□□ -1.57
PCNAP12004 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.23□□□□□ -1.57
PCNAP12004 AC013262.1-201ENST00000426710 252 ntBASIC5.23□□□□□ -1.57
PCNAP12004 RPS29P14-201ENST00000431518 171 ntBASIC5.23□□□□□ -1.57
PCNAP12004 AL450263.2-201ENST00000439400 589 ntBASIC5.23□□□□□ -1.57
PCNAP12004 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 XKRYP5-201ENST00000449659 483 ntBASIC5.23□□□□□ -1.57
PCNAP12004 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 RN7SL51P-201ENST00000468230 285 ntBASIC5.23□□□□□ -1.57
PCNAP12004 AC092754.1-201ENST00000472975 479 ntBASIC5.23□□□□□ -1.57
PCNAP12004 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 IGBP1P4-201ENST00000503202 879 ntBASIC5.23□□□□□ -1.57
PCNAP12004 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.23□□□□□ -1.57
PCNAP12004 HMGN1P9-201ENST00000515212 298 ntBASIC5.23□□□□□ -1.57
PCNAP12004 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.23□□□□□ -1.57
PCNAP12004 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 AC109635.6-201ENST00000525487 1113 ntBASIC5.23□□□□□ -1.57
PCNAP12004 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.23□□□□□ -1.57
PCNAP12004 AC027544.3-201ENST00000535082 757 ntBASIC5.23□□□□□ -1.57
PCNAP12004 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.23□□□□□ -1.57
PCNAP12004 AGGF1P9-201ENST00000561884 913 ntBASIC5.23□□□□□ -1.57
PCNAP12004 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 AC106730.2-201ENST00000566641 540 ntBASIC5.23□□□□□ -1.57
PCNAP12004 MIR3936-201ENST00000584304 110 ntBASIC5.23□□□□□ -1.57
PCNAP12004 MIR7853-201ENST00000584820 132 ntBASIC5.23□□□□□ -1.57
PCNAP12004 EIF1P5-201ENST00000585002 234 ntBASIC5.23□□□□□ -1.57
PCNAP12004 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.23□□□□□ -1.57
PCNAP12004 RPAP2P1-201ENST00000603626 1168 ntBASIC5.23□□□□□ -1.57
PCNAP12004 AC108738.1-201ENST00000603703 237 ntBASIC5.23□□□□□ -1.57
PCNAP12004 AC027449.1-201ENST00000608890 407 ntBASIC5.23□□□□□ -1.57
PCNAP12004 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 AC127024.6-201ENST00000621598 424 ntBASIC5.23□□□□□ -1.57
PCNAP12004 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.23□□□□□ -1.57
PCNAP12004 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.23□□□□□ -1.57
PCNAP12004 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCNAP12004 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 AL450345.1-202ENST00000605741 3881 ntBASIC5.23□□□□□ -1.57
PCNAP12004 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms